Bipolaris oryzae: COCMIDRAFT_104082
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Entry
COCMIDRAFT_104082 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
bor
Bipolaris oryzae
Pathway
bor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
COCMIDRAFT_104082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bor03041
]
COCMIDRAFT_104082
Spliceosome [BR:
bor03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
COCMIDRAFT_104082
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
Motif
Other DBs
NCBI-GeneID:
19118438
NCBI-ProteinID:
XP_007691277
JGI:
Cocmi1_104082
UniProt:
W6YXF7
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MSKRPALEPLEEMYDAPSPAMKRPKVEDEEMEDSDTNGATSNGHLMAPRPQDQDKIDILE
EAGALDDEDGDEPAVAAPKRQIAPEAEYTDLYLDTINRKVLDFDFEKLCSVTLSNINVYA
CLVCGKYYQGRGPKSQAYFHALEEGHHVYVNMETKKVYVLPEGYEVTSKSLDDIKFVVDP
RMSKEEVAKLDKEPKVSWDLSNREYIPGFVGMNNIKANDYFNVVIQALSHVVPLRNYFML
EDLSSRPQLAQRFSTLVRKIWNPRAFKTHVSPHELLQEIALRSSKRFTLTDQSDPVDFLS
WFLNNLHLAVGGSRTKPHSSIIQKVFQGTLKIEQQEITARADAGDRLRFEDAAVQTTTSH
FLVLTLDLPAAPLFQDAIEKNIIPQVPLVNILSKYNGVTPQEKSKNRVRYRLLHPLPPYL
LFNIKRFSKNKFVAERNPTIVTFPVHSLDMSPYVEPNPTEYPPGEPIWYDLVANITHEAV
KKKDDSVEGELESKIWRVQVKDRAREEWYGIQDLFVEKERAETLFTKEAYLMVWERRKGQ
AGRRK
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcgaccggccctggagcctctcgaggaaatgtacgacgcgccgtcgccagct
atgaagcgcccgaaagtcgaggatgaagagatggaagactccgatacgaacggcgcgact
agcaatggccacctcatggctccccgaccgcaagaccaagacaagatagacattcttgaa
gaagccggtgcattggacgacgaagatggtgacgagcccgcagtcgctgcgccaaaacgt
cagattgcgccagaagctgaatacaccgatctttaccttgacacgataaaccgcaaggtc
ctcgactttgactttgaaaagctatgctccgtcacactgtccaacatcaacgtatacgcc
tgtctcgtgtgtgggaaatactaccaaggtcgagggccaaagtcacaagcatactttcat
gcgctggaagagggacaccacgtatacgtcaacatggagacgaagaaggtctatgtgctt
ccagagggctatgaagtgacgtccaagtcgctagacgacatcaagtttgtcgtggacccg
cgcatgagcaaggaggaggtagcgaagttggacaaggagccaaaagtgtcgtgggatctg
tcaaatcgtgaatacataccaggctttgtgggcatgaacaacatcaaggcaaacgactac
ttcaacgtagtaatacaagccctctcccacgtcgtcccactgcgcaactacttcatgctg
gaagacctctcatcccgcccgcagctcgcccaacgctttagcaccctcgtccgcaaaatc
tggaacccccgcgccttcaaaacccacgtctctccgcatgagctgctccaagaaatcgcc
ctccgctcctccaaacgctttaccctaaccgatcaatccgaccccgtcgacttcctctcc
tggttcctcaacaacctccacctcgccgtcggcggctcccgcacaaaaccccacagctcc
atcatccaaaaagtcttccaaggcaccctcaagatcgaacaacaagaaatcaccgcccgc
gccgacgccggcgaccgcctccgcttcgaagacgcagccgtccaaacaacaacctcgcac
ttcctcgtcctaaccctcgacctccccgccgcgcccctcttccaagacgcaattgagaaa
aacataatccctcaagtccccctcgtaaacatcctctccaaatacaacggcgtgaccccg
caagagaaatcaaaaaaccgcgtccgataccgtttactgcaccccttacccccatatcta
ctcttcaacatcaaacgcttctcaaaaaacaaattcgtagccgaacgcaaccccaccatc
gtcaccttccccgtacactccctcgacatgtctccatacgtcgaacccaaccccacagaa
tacccccccggagaacccatctggtacgatctcgtagccaacatcacgcacgaggcggtc
aagaagaaagacgatagtgtggagggcgagctcgaaagcaaaatttggcgcgtccaagtc
aaggatcgcgccagggaggagtggtatgggatccaggatttgtttgtcgagaaggagagg
gctgagacgctgtttaccaaagaggcgtatttgatggtttgggagaggaggaaggggcag
gctggacggaggaagtga
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