KEGG   Bipolaris oryzae: COCMIDRAFT_104563
Entry
COCMIDRAFT_104563 CDS       T03125                                 
Name
(RefSeq) hypothetical protein
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
bor  Bipolaris oryzae
Pathway
bor03420  Nucleotide excision repair
bor03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:bor00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    COCMIDRAFT_104563
   03460 Fanconi anemia pathway
    COCMIDRAFT_104563
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bor03032]
    COCMIDRAFT_104563
   03400 DNA repair and recombination proteins [BR:bor03400]
    COCMIDRAFT_104563
DNA replication proteins [BR:bor03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    COCMIDRAFT_104563
DNA repair and recombination proteins [BR:bor03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     COCMIDRAFT_104563
SSDB
Motif
Pfam: ERCC4 CBP4 UQCC3
Other DBs
NCBI-GeneID: 19118537
NCBI-ProteinID: XP_007691437
JGI: Cocmi1_104563
UniProt: W6Z301
LinkDB
Position
Unknown
AA seq 1080 aa
MPSARTYIKAFSAGAVLCVGGPALVWYVTPTEEEIFKRYNPELQKKALAGREQRQKEFDA
FVGQLKEAARSDKPIWTAQKEMDAKRSEAEQQARRDERDAYAAESRKRQAEIRASADIRL
NWLTYGLCSQSCQELPPISSHWSRAHEFQQDIFNELRGEDELVLLARGLGLLRIVTNLLH
SYDAAGNNLILLVGADDHENVWIGEALAEHAAVSNAPKCRGLSLVNTDLMSVGTREKMYV
QGGIFSITSRILIVDFLSGLLNPETVTGVVVLHAERVVATSLEAFILRIYRQKNKVGFLK
AFSDTPEPFTTGFSPLTNMMKNLFLTKPALYPRFHVAVANSLEGRKKAEVIELEVPMTEA
MQDIQNAVLACVEASISELKKGNPGLEVEDWTVDSALHKNFDQIIRRQLDPVWHRTTFKT
RQVVRDLSLLRTILHALLTYDAVNFNKYLDTVLAASQPPPGSTKQNQSPWLFLDAADTIF
TTAKRRVYTGKVSNAELANATNAVPESLEPVLEEFPKWTQLAEILQEIEQDAYLNPTPQD
SSNGSILIMCGDQGTAAQLREYLQTMYVKPEGSGDEDEDEYEPSAKFMMRRKLRNYLAWK
RDFGKVSAALFSENQKAINSNTDKNAQSGARPTSGKPPPNKRRRVRGGANAAAGPSRGDT
GAVRTAGDRDAHIASLMAELEPTEVEAAQKPGEVGLDPLDNMESYYELFDMNSLIIIHPY
SGDLDEHVLDETKPRYVIMYEPDAAFIRRIEVYRSSHTDRTVKVFFMYYGGSVEEQRYLS
AVRREKDAFTRLIKERANMAFTQNPSANLAPEESFLRTINTRIAGGGRLAATAEPPRVVV
DVREFRSSLPSLLHGRSMVIVPCMLTVGDYVLTPQICVERKSIRDLIASFTNGRLFNQVE
SMTEHYKHPMLLIEFDQNKSFTLEPFTDFSAPAASSTSSAFSSATTPDLQSKLVMLTLAF
PRLRIIWSSSPYQTAEIFAELKKQQDEPDPLRAVQLGLDPHLSGDEMRSFNQTSQDMLRA
LPGINENAVTTLMLQSENILEVANMSEREICWLVGTDVGRRAHRFLNRSVYEDVQLQVFS
NT seq 3243 nt   +upstreamnt  +downstreamnt
atgccgtccgcccgaacatacatcaaagccttctcagcaggtgcagtcctctgcgtaggc
gggccagcgctcgtctggtatgtcacgcccacagaggaagaaatcttcaagaggtacaat
ccagaacttcagaagaaggcactggcaggacgagagcaaagacagaaggaattcgatgca
ttcgtcggccagttgaaagaggctgcaaggtcggataagcctatctggactgcacagaag
gaaatggatgcaaagaggtcagaggcggagcagcaagcccgcagagacgagcgtgacgcc
tatgctgctgagagcaggaaaagacaggccgagatcagggcaagcgcagatatacgattg
aattggctgacatatggcctttgctctcaaagttgccaagaattacctccgatatcctcg
cattggtctcgcgcccatgagtttcagcaagacatcttcaatgagctacgcggggaagat
gagctcgtccttctcgcccgcggcctcggccttttgcgcattgtcacaaatctcctacac
tcgtacgatgccgctggtaataacctcatcttgctcgtcggagccgacgaccacgagaat
gtgtggatcggtgaggcgctggccgagcacgcggctgtcagcaatgcgcccaaatgtcgt
ggcctgagcctagtcaataccgatctaatgagcgtcgggacacgcgagaagatgtatgta
caaggcggcatattcagtattacatcgcgcatcctcattgtggatttcttgtccggcctg
ctcaacccagagacggtgactggtgtcgtggttctccatgccgaacgagtcgtggccaca
tcccttgaggccttcatcttgagaatatatcggcagaagaacaaggttggcttcttgaaa
gccttctcggacacgccagagcccttcaccacgggcttctctccgctcaccaatatgatg
aagaacctattcttgacaaaaccagcgctatacccaaggtttcatgtcgccgttgcaaac
tcgctcgaagggcgcaaaaaggccgaagtaattgaattagaggtgcccatgacggaagca
atgcaggatatacagaatgccgtcttggcatgtgtggaagccagcatcagcgagctcaag
aagggcaacccagggttggaagttgaggactggacagtggacagtgcattgcataagaac
tttgaccagatcattcgacggcagttggatcctgtttggcatcggaccactttcaagacg
cgacaggttgttcgtgacttgtccctattacggaccattctgcatgcgctcctcacctac
gatgctgtaaacttcaataagtatctcgataccgtcttggcggcttcccaaccaccacca
gggtcaacgaagcagaaccagtccccctggttgtttctagatgccgctgataccattttc
acaacggccaagcggagggtgtacacgggcaaggtatccaacgccgagctagccaacgcc
acaaatgcagtacccgagtcactggaacctgtcttagaagagtttcccaaatggacgcag
ctagctgaaattttgcaagagatcgagcaagatgcatatttgaatcccacaccgcaggat
tcgtctaatgggtcgattctcatcatgtgcggcgaccagggtacagcagcgcagttacgg
gaatatttacagaccatgtatgtcaaaccagagggctctggagatgaagatgaagacgag
tatgagccatcagcaaagttcatgatgcgacgcaagctgcgcaactacctggcctggaaa
cgcgactttggcaaagtcagtgcagctttattctcagagaaccaaaaagccatcaatagt
aatacagacaagaatgctcagagtggcgcacgtccaacttctggcaagcctccgcctaac
aagcgacgtcgcgtcagaggaggagccaacgcagcagctggtccttcaaggggtgacaca
ggcgcagtccgtacagctggagatcgtgacgcgcacattgccagcctcatggccgaactt
gagcccacagaagtggaagcagcacaaaaaccgggggaagttggtcttgatcctttagac
aacatggaaagctactacgaactcttcgacatgaactcattaatcatcatacatccctac
tctggggacctagacgagcacgttctcgacgaaacgaaaccgagatatgttatcatgtac
gagccagatgcggccttcatccggcgcatcgaagtgtaccggtcctcgcatacggaccga
actgtcaaagtattcttcatgtactatggcggcagtgtagaagagcaacgctacttgtcg
gctgttcgtcgcgaaaaagacgccttcacgcggcttatcaaagagcgcgcaaacatggca
tttacccagaacccatctgccaatctcgcgcccgaggagtcctttttgcgcacaatcaac
acaaggatagcaggaggaggccggctcgccgccaccgctgaaccccctcgcgtagtcgtc
gacgtacgagaattccgctcatcacttccttccctcctccatggccgctccatggtcatc
gtcccctgcatgctcacagtcggcgactacgtcctcaccccgcaaatctgcgtagagcgc
aaatccatccgcgacctaatcgcctcattcacaaacggccgtctcttcaaccaagtcgaa
tcaatgaccgaacactacaaacaccccatgctcctcatcgaattcgaccaaaacaaatcc
ttcaccctcgaaccctttaccgatttctccgcccccgccgcctcaagcaccagttctgcc
ttctcatcagcaacaacccccgatctccaatctaaactcgtaatgctcaccctcgctttc
ccccgcctccgcatcatctggtcctcgtccccttatcaaaccgcagaaatctttgcagag
ttgaagaaacagcaagatgaaccggatcccctgcgcgccgtccagttgggtctcgatccc
catctcagcggcgatgagatgcgcagttttaaccagacgagtcaggatatgctgagggcg
ctgccgggaattaatgaaaatgcggttacgacgctgatgcttcagagcgagaatatactc
gaggtggcgaatatgagtgagcgcgagatttgttggctcgtgggtacggatgtggggagg
agggcgcatcggtttttgaatcggagtgtgtatgaggatgtgcagttgcaggtgtttagt
tag

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