Bipolaris oryzae: COCMIDRAFT_106134
Help
Entry
COCMIDRAFT_106134 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
bor
Bipolaris oryzae
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bor03400
]
COCMIDRAFT_106134
Enzymes [BR:
bor01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
COCMIDRAFT_106134
DNA repair and recombination proteins [BR:
bor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
COCMIDRAFT_106134
Prokaryotic type
COCMIDRAFT_106134
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
19118807
NCBI-ProteinID:
XP_007692040
JGI:
Cocmi1_106134
UniProt:
W6YV76
LinkDB
All DBs
Position
Unknown
AA seq
535 aa
AA seq
DB search
MSKRTSYQRDELGHTSAKRAKQVDENLPYDQVQEALSAQDEVRDVTKVAHWFHPKDLRIQ
DNTALHHASELAKSAKKPLVCFYINCPADESWHGTSPARVDFMCEGLKIMQRELKELNIP
LVFVECEDRKRIVEAAVEWLKNHKVSHVFGNYEYEIDELRRDLKLVKTSGKDIQVSLFHD
QTVIEPGTMTTSSGSPMKVFTPYHKAWLSRLREEPELLDTRPPPTANPSSMKKELKDLFD
TPAPKPAKDKQFKSEDEKKRIRKLWPAGHTEGAKRMDSFLKQISHYASTRSNPAANSTSR
MSAYFSAGMFSVREALRKVVDYNRGSTDFTESKASGGVYSWVREIVFRELYRQHTVCVPH
TSMNLPQNLKFNSVQWEDDKEGWEKWYKGQTGEPFIDAGMRQLNAEAYMHNRLRMNVSSY
LYCNLLLDYRRGERYFAETLIDWDLSNNTQGWEPSYTVFNPVSQAEKNDPDGDYIRKWVP
ELKDVKGKAVFAPYARLSKEEFEKLGYPKPHVDWKETKARAIDRFKRGLREAELE
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagagaacatcttaccaacgtgacgagctcggccacacatctgcaaaacgcgca
aagcaagtcgacgaaaatcttccttacgatcaagttcaggaagcactcagcgcgcaagat
gaggttagagacgtgacaaaagtagctcactggttccaccccaaggacctccgaatacag
gataacaccgcgctgcatcatgcttctgagcttgcaaaaagcgccaagaaacctctggtg
tgcttttacatcaactgtcctgccgatgaatcatggcatgggaccagcccagcaagagtc
gatttcatgtgtgaggggttgaagattatgcaaagagaactcaaggaactaaacatacca
ttggtctttgtagagtgcgaagacaggaagaggattgttgaggcagccgttgagtggcta
aagaatcacaaagtttcccatgtctttggtaactacgagtatgagattgacgagttgcgc
cgagatctgaagttagtcaagacttctggaaaagacatccaggtatctcttttccacgat
cagactgttattgaaccaggtacgatgaccacatcgtccggttcgccaatgaaggtcttc
acaccatatcataaagcctggctcagcagactacgagaagaacccgagctccttgataca
cgccctccacctaccgcaaacccttcgtctatgaagaaagagctcaaggatctgttcgat
acaccagcacccaagcccgccaaggataagcaattcaagtcggaagatgagaagaagagg
atacgaaaactttggccggctggccacactgaaggcgcaaaacgcatggattcgtttctc
aaacaaatttcccattacgcatctacccgctctaacccggccgcaaacagtacatcgcgc
atgtcggcctacttcagcgcaggcatgttttccgtgcgcgaagctctccgcaaagttgtc
gactacaaccgcggcagcactgacttcaccgaatccaaagcctcaggcggcgtctacagc
tgggtgcgagaaatcgttttccgcgagctatatcgacagcacacagtctgcgtgccgcac
acatccatgaatctaccgcagaacctcaaattcaactctgtacaatgggaagacgacaag
gaaggctgggaaaaatggtacaagggacaaactggcgagccttttatcgacgcaggcatg
cgccagctaaatgctgaagcatacatgcacaatcgcctgcgtatgaacgtgtcgtcatat
ctatactgcaatttgcttctcgactaccgccgtggcgagcgctactttgccgaaaccctc
atcgactgggatctctccaacaacacgcagggctgggaaccaagctacaccgtgttcaac
cccgtgtcgcaggccgaaaagaacgatccagatggcgattatatcaggaaatgggttcct
gagctcaaggatgtaaaaggcaaggctgtcttcgcgccgtatgcaaggctgtcaaaggaa
gagtttgagaaattgggatatcccaagccgcatgtggattggaaggagacaaaggctagg
gcaattgataggtttaagaggggattgagggaggcagagcttgagtag
DBGET
integrated database retrieval system
