Bipolaris oryzae: COCMIDRAFT_106900
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Entry
COCMIDRAFT_106900 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K16578
CLIP-associating protein 1/2
Organism
bor
Bipolaris oryzae
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bor03036
]
COCMIDRAFT_106900
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bor04812
]
COCMIDRAFT_106900
Chromosome and associated proteins [BR:
bor03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
COCMIDRAFT_106900
Cytoskeleton proteins [BR:
bor04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
COCMIDRAFT_106900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
HEAT_ECM29
LEH
Motif
Other DBs
NCBI-GeneID:
19118941
NCBI-ProteinID:
XP_007692337
JGI:
Cocmi1_106900
UniProt:
W6YP31
LinkDB
All DBs
Position
Unknown
AA seq
1219 aa
AA seq
DB search
MEKETSDLLKALQKPSTDVQSRLALFNTLKSSIKHNRVPENCQAPIFECIRIACTAATSA
ALVSTGFSTLSHFIKRLQLQKDTHILTSQSSVLCSILADKLGDARESHRIAASQILADLH
YLFSAEIDALIHDAVKSTNPRAKEASMAWVVKMNKTEGLPFKSYSNQLVANLEDADAGVR
DTAKKAVVDLFGYAPEHAKANLKKQLVAMNVRKAIASYITTHLDDAAMTKDADVAPQPPP
QQTQLPPQPASFSRSISAKRAEQLQPDVGLADSYASELPPPAEVVVMDPIHIYTQRELDD
IFRDMAPWYEGKESEANWLARDKNCTKLRRILKGNAPHEFHGVFVAGIKSLLDGILKVAN
SLRTTMSTNGCLLVQELAKTLGSAIDPWSEILLQCFVKMCAATKNIAAQNGNVTVDTIFQ
NVSYSSRLLQHVLFASQDKNVQPRTFSATWIKTLIRRHTSHIEHSGGMDTLDTIIKKGVT
DANPKVREAYRSAYWTFALVWPQRAEKMLDTFEKRERSALEKDPNNPNSSLASSQTSSAS
FSKSVGPGTSRSALKEKIAEQRRAKLAAAKNMPERPNSAAATYAAPAKPQPSKPTTARTI
SNLSAPSSGPARPPSAMSGESTKSALKNSTGTGSLMSGTVRRPIRPPRPELNRPATADPY
AVRRPGKSTPNMTPEKTPATSTVKKSATSKSTARPRSQTHNSPTVSPARPKSRIGQPVAH
SKTLSGGSRHASPAASPAKDGESTTRKPWVRSQSHHDSGTIPFRHRNGLGGSAAIDNEAI
DLGDDDNFTMVIPDLAKPAAQPTQRTPPKPRVSAGRLPVPSPRASMLRSPKSMGHLEAAS
LRSSTRSLSTRTPDRPGTRGTDAGDAVRVYEDPFVGEEPARMAKEPEKLVLEELPINEKS
NERRHSSGSVSSGIMMGNDNDERPRGHHKTNSTGSILQTESYDTANAEVLKNRQLLASGI
RKIEGRTVEAHMFRRMQDMVKSNQEIWGPNDENFGKLLVACLDFLEAPVHELKTPQIKAV
NLKVQALATIRALLSLYRKETARYSARVLRTILQTKAQYENTSHMAMDLEVTADEIVKYG
HTLDCLETVLSLIEDLSASTPSSSPNSKSSVCSVPGQAPTRTLTMSLTTLASLVQISGEK
NLALSPEQTARLGRLAVRCMDDQDADVRKADIEFCVALHQRINGSDAAKEDGGFWKVVAG
AREQHLNLLTYYLAKKSRT
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagagacgtcggatctgctcaaggccctccagaagccctcgacagatgtccag
tcccgtctagcgctcttcaacaccctcaagtcgagcatcaaacacaacagagtccctgag
aactgccaggccccaatcttcgagtgcatccgcatcgcctgtaccgccgccacctccgcc
gccctcgtctcgacaggcttctcgacactgagccacttcatcaagcgactgcagctacaa
aaggacacacacattctcacctcgcaatcctcggtcctatgctccattctcgccgacaag
ctgggcgatgcgcgcgagagccatcgcattgccgcctcgcaaatcctcgctgatctgcac
tacctgttttctgcagagatcgatgcgctcatccacgatgccgtcaagagcaccaacccg
cgcgccaaggaggcgtccatggcctgggtagtaaagatgaacaagaccgaaggcttgccc
tttaagagctactcgaaccagctcgtcgcaaatctcgaagatgctgatgctggcgtgcgc
gacacggccaagaaggccgttgtcgacctctttggatatgcaccagaacacgccaaagcg
aatttgaagaagcagctcgttgctatgaacgtccggaaagccatcgccagctacatcaca
acacacctcgacgacgccgcaatgacaaaggatgcagacgtagcgccacagccaccaccg
caacaaacacaactcccaccccaaccggcttcattttcacgcagtatttctgcgaagcga
gcggagcaattgcaacctgacgtgggtttagcagacagctatgcgtccgaactaccgccg
cctgccgaagtcgtcgttatggaccctattcacatctatacacagcgcgagctggacgac
atcttccgcgacatggcgccttggtacgagggaaaagaaagcgaggccaactggttagcg
cgagacaagaattgtaccaagctgaggcgcattctgaagggtaacgcgccgcacgaattc
cacggagtttttgttgctggtatcaaatcacttcttgatggcatcctcaaagttgcaaac
tcactccgaacgacaatgtcaaccaatggctgcctgctggttcaagagcttgccaagacg
cttggctccgccattgatccctggtccgagattctgttgcagtgtttcgtgaagatgtgt
gctgccaccaagaacatcgctgcgcagaacggaaacgtcacggtggataccattttccaa
aacgtctcatacagcagtcgtctgctccaacatgttcttttcgcatcacaggacaagaac
gttcagccaagaacgttttctgccacatggatcaagaccttaattcggaggcacacatcg
cacattgagcattctggcggaatggatacattggacactataatcaaaaagggagtcact
gacgctaaccctaaggtgcgcgaggcttatcgaagcgcatattggacatttgccttggta
tggcctcagagggccgagaagatgcttgacacattcgagaagcgcgaaaggagcgctctt
gagaaggaccccaacaatccaaatagttcactcgcctcttcacagaccagctcagcatcc
ttttcgaaatctgtcggtcccggtacttcgcgaagtgctctgaaagagaagattgctgag
cagagaagagccaaattagctgccgcaaagaacatgcccgagcgacccaactctgctgct
gcaacttatgccgcaccagcaaaaccgcaacctagcaaaccaacaactgcaaggacgatt
tccaacctttctgcaccatcttctgggccagcacgacctccttcagccatgtccggcgag
tcgacgaaatcagcgctgaagaactctacgggtactggctcgctgatgtcagggacagta
cgccgtccaattcgccctcctcgacctgagctgaacagaccggcgacagccgacccatac
gctgttcggcgaccaggcaagtcaactcctaacatgacgccagaaaagacgccagctaca
tcgactgtaaagaagtcagctacatcgaaaagtactgcccggccgcgatcgcagactcac
aacagcccaactgtcagccccgctcgtcccaaatcaagaattggtcaacctgttgcacac
agcaaaactcttagtggaggctcacgacatgcaagtccggctgcgagccctgcgaaggac
ggagaatcgaccacgagaaagccgtgggtaaggtcgcaaagccatcacgactcaggcact
atcccattccggcacaggaatggacttggtggaagtgcagctatagacaacgaggcgatt
gacttgggcgatgatgacaacttcacaatggtcattccagatctagcgaaacctgcagca
cagcccacgcaacgcacaccaccgaagcctagggtttccgcaggccgactgccagtgccg
agcccccgtgcatcaatgctaaggagcccaaagtctatgggccacctcgaggctgccagc
ttgcgctcatcgacacgaagtctaagtacgagaacaccagatcgaccgggtactcgaggg
accgacgctggagatgcggtccgggtgtatgaagatccatttgttggcgaggagccggcg
cgcatggcgaaggaaccagaaaaacttgtcctcgaggagctacccattaatgagaagagc
aacgaacgtcgacacagtagcggaagcgtatcgagtggcatcatgatggggaatgacaat
gacgaacgcccacgcggtcaccacaagacgaacagtacgggaagcattttgcagacagag
agctacgacacagccaatgctgaagtgcttaagaaccgacagctgctggcgagtggtatc
aggaagatcgaaggtcgcacagtagaagcccatatgtttcgacgcatgcaggacatggtc
aagtcgaatcaggaaatttggggacccaatgacgaaaactttggcaagctactcgtagct
tgtctcgacttcctcgaggcaccagttcatgagttgaagacgccccagataaaggctgtc
aatttgaaggtacaggcgctagcgacgatccgtgcgttgctctctttataccgcaaggag
acagcccgatactctgcccgtgtgcttcgaactattctacagacaaaagcacagtacgag
aacacttcgcacatggccatggatctcgaggtaaccgcagacgagattgtcaagtatggc
cacacactcgactgcctcgaaactgtcctttccctcatcgaagacttgtccgcctcaacc
ccatcatcctcaccaaattccaagtcctcagtctgctcggtccccggtcaagcacccacc
cgcacattaaccatgtcgctcaccacgctcgcatcgctcgtccagatcagcggcgaaaag
aacctcgccctgtcacccgaacaaaccgctcgcctcggtagactagccgtccgctgcatg
gacgaccaagacgccgatgtccgcaaagcagacattgaattctgcgttgccctccaccag
cgcatcaatggctcagatgctgcgaaggaagacggcgggttctggaaagtcgttgctggg
gcaagagaacagcatctcaacttgctcacttactacctcgctaagaagagcaggacgtaa
DBGET
integrated database retrieval system
