Bipolaris oryzae: COCMIDRAFT_106997
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Entry
COCMIDRAFT_106997 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
bor
Bipolaris oryzae
Pathway
bor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
COCMIDRAFT_106997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bor03019
]
COCMIDRAFT_106997
Messenger RNA biogenesis [BR:
bor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
COCMIDRAFT_106997
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
HBS1_N
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP-eEF1A_C
Roc
Ras
CysA_C_terminal
TraH_2
Septin
Motif
Other DBs
NCBI-GeneID:
19118959
NCBI-ProteinID:
XP_007692356
JGI:
Cocmi1_106997
UniProt:
W6YUA3
LinkDB
All DBs
Position
Unknown
AA seq
803 aa
AA seq
DB search
MPPKSGFSRTRNVDYDDDDLYDDDYYEEEGDDGGAGDGMSEEDREQMRAGTIRVREAMGD
MSDFTSDEQIQEALWHYYYDVGKSVSYLKNKLGIVEPKKEAPKQEKAKPASRFDQAASVA
HQNAPASTGKQTHMRSSYGNQPARLVAHHLPLPPLSMPTNAPVTDFFWDVPWGNVPPERL
ADIAIEAPEHKGGLLGGSSKLAALAAKRRKEREEAEAAASKANSDADSAVAMLDKLSVKN
QGNVNPLHDAAASRSARVSKYPVRRRSPSPAPETPKEPEIEEPQLPQPAIVVESPAQRAI
ASMFASTLCGSDKPLKQPQLHVQELPVPFAAYKSFDGTKVFSKPSPDDIKKKQTNGDLTE
SVEKLSVADEPKVKSKNLNVVDEFEKSNMKRLANFVVVGHVDHGKSTLMGRLLYDLKVID
QRSIDKLRKEAETIGKSSFALAWVMDETSEERSRGVTVDIATNYFETEKTRFTILDAPGH
KDFIPNMISGASQADFPVLVIDASTNSFESGLKGQTKEHIMIARSMGMQHIIIAVNKMDM
VGWSKSRFDEIAKRMTAFLTEASFLEKRITFIPLAGLTGENVVKKIENSAAHWYTGETLL
EALERIEIPQRNLQKALRLSVADVFKGDMRSPLSISGRIDSGTLQVGDVILALPANETAT
IKSIEVQDAPVDWAVAGQIPTLHLTDIDPVHLRQGDIICAPKDPVKLVKAFTSKLLAFEH
VLPMPVEVFRSTLNSPGSIRTLSARLNKFTGEVMKKKPRIVKPGEVARIVVQLERELPIE
EGMRVVLRERGRTVGAGLMENVA
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgccacccaaaagcggcttctcgcgcacgcgcaacgtcgattacgacgacgatgacctc
tatgacgacgactattacgaggaagaaggcgacgatggcggcgcgggagacggcatgtcg
gaagaagacagagagcagatgcgcgcgggcacaatacgggtgcgcgaagcaatgggagac
atgagtgatttcacaagcgacgagcaaatacaagaagcgctgtggcactactactacgat
gtgggtaaaagtgtgagctacttgaaaaacaaactggggattgtagagcccaagaaggag
gcaccgaaacaagaaaaggctaaaccagcatcgcggttcgaccaggctgcaagcgtcgct
caccagaatgcgcccgcatccacaggtaagcaaactcacatgaggtctagctatggaaac
cagcccgctcgtcttgttgcccatcacctaccgctgcccccactgtcgatgcctaccaac
gctcctgtcacagacttcttctgggatgtgccttggggcaatgtaccacccgagcgactg
gccgatatcgccattgaagccccagagcataaggggggattactcggaggctcttcaaag
ctagctgcgctcgcggctaagcgtaggaaggagcgagaagaagccgaagctgctgcctcc
aaagccaatagcgatgcggactcggctgttgcgatgctcgataagctttcggttaagaat
cagggaaacgtcaaccctttgcatgacgcagccgcgagtcgctcagctcgagtatccaaa
taccctgttcgaagacgatcgccttctccagcaccagaaacaccaaaagagcccgagatt
gaagagcctcagctcccccaaccggccattgttgtcgagtctccagctcagcgtgctatt
gcttccatgtttgcttcaactctctgtggttccgataagccgttaaagcaaccgcagctc
catgtccaagagcttcccgtgccattcgctgcctacaagtcatttgatggtacaaaagtc
ttctcgaaaccaagtccggacgatattaaaaagaagcagactaatggcgatcttaccgaa
tcggtcgagaagctttctgttgccgatgaaccaaaggttaagagcaaaaacttgaacgtg
gtggatgaatttgagaagagcaacatgaaacgacttgcgaattttgtggttgttggacat
gttgaccacggcaagagtacactgatgggccgtttgctgtacgacctcaaagtaatcgac
cagcgatcaatagataagctgcgaaaggaagccgagactattggaaaatcgtcctttgca
ttagcctgggtcatggacgaaacaagcgaagaaagaagccgtggtgttacagtagacatt
gcgacaaactacttcgagacagagaagacacgattcacgatattagatgctcctggccac
aaggacttcattccaaacatgatatcaggagcatcgcaagccgactttcccgttctggta
attgacgccagcaccaacagtttcgagtctggcctcaagggtcaaactaaggaacacatt
atgattgcacgaagtatgggcatgcagcacattatcattgctgtcaacaagatggacatg
gttgggtggtctaaatctcggttcgacgagatagcaaaacgcatgacggcgttcctgacc
gaagcaagttttctggagaaacgaatcaccttcatcccgctggccggtcttacaggcgag
aacgtcgtcaagaagattgaaaactctgccgctcattggtacactggcgagacattactc
gaagccctagagcgcatcgaaataccgcaacgcaatctccaaaaagcacttcgcctctct
gtcgccgacgtattcaagggcgacatgcgctcaccgctcagcatatccggacgaatcgac
tctggaaccctacaagtaggcgatgtaatcctcgcgctccccgccaacgaaaccgcaacc
atcaaatccatcgaagtccaagacgcccctgtagactgggccgtcgcaggccaaatacct
accctacatctcacagacattgaccctgtccatctccgccaaggcgacattatctgcgcc
cccaaagaccctgtcaaactcgtcaaggcattcacatctaaactcttggctttcgagcat
gtactacctatgcctgtagaggtgtttcgcagcacactcaactcgccgggtagcatccgc
acgctgagtgcccgcctgaataagtttacgggcgaagtcatgaagaagaagccgagaatt
gtgaagccgggtgaggtggcgaggatcgtggtgcagcttgagagggagttgccgattgaa
gaagggatgagggttgtgcttagagagagggggaggacggttggggcggggcttatggaa
aatgttgcttag
DBGET
integrated database retrieval system
