Bipolaris oryzae: COCMIDRAFT_107748
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Entry
COCMIDRAFT_107748 CDS
T03125
Name
(RefSeq) polysaccharide lyase family 4 protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
bor
Bipolaris oryzae
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
COCMIDRAFT_107748
Enzymes [BR:
bor01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
COCMIDRAFT_107748
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Ortholog
Paralog
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
19119109
NCBI-ProteinID:
XP_007692650
JGI:
Cocmi1_107748
UniProt:
W6ZAU3
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MYLYTTTTTTTATLLLALTTLTTPTLAAFGVNKTKDSITIDSGSTAPFLFTVSTTSCDIT
SLNYAGEELQSPTKGSHIASGLGSATVSYDIIGTSYIKVTCTTPTLTQYIVAKAGEATIY
MATDITAEPEIGELRFIARLDSAKVGLSWPFGIVSTTANATGTVEGEDVFLVADGETRSK
FYSSERFIDDAVHCVYRDTNPIHVCLLMDSYSYETSAGGPFHRDINTNNAGPANSLTFYM
NSNHVQLEKYRMGMKGPYALSFSRSDIPKGGSSMDTTFFKDLSIPNYVPPSARGTVTGKA
TGVSSTAQAVVHWYNDAAQYWAYASSSSGTFTSPAMKPGTYTQVLYQGEFKVKAISVMVT
AGSTTTANIAADTEPKTSLWRIGEWDGQPKGFRNADKQLRMHPSDSRMAPWVPLTYTVGT
STLDSVPMALVKDLNPLTINFTSKQKNTAALSLRVGTTLAFAGCRPAVTLNTNFSPAVPA
APTKIASRGFTRGAYRGFGEVYDYAIPAGTLVEGANTIRISCLSGESGTGFLAPNVILDA
IELLE
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtacctctacacaaccaccaccaccaccaccgccaccctcctcctcgccctcaccacc
ctcacgaccccaaccctcgccgccttcggcgtcaacaaaaccaaagacagcataaccatc
gattccggctccacagcccctttcctcttcacagtctccaccacatcctgtgacatcaca
tccctcaactacgccggcgaggagcttcaatcccccacaaagggctcgcacattgcttct
ggcctcggttccgccaccgtcagctacgacatcatcggcaccagttacatcaaggtaaca
tgcacgacgcctacactcacgcagtacattgttgccaaagccggagaggcgaccatctac
atggcgacggacattactgcggagcctgagattggcgagttgcggtttatagcgcggctg
gatagtgccaaagtggggctgagttggccgtttgggatcgtgtctacgacggcgaatgcg
acggggacggtcgaaggcgaggatgtttttttggtggccgacggggagacgaggagtaag
ttttactcgagtgagaggtttattgatgatgctgtgcactgtgtgtatcgggataccaat
ccgattcatgtctgtttgctgatggattcgtattcgtatgagacgtcggccggtggacct
tttcatcgcgatatcaatactaataatgcgggtccggcgaattctctgacgttctacatg
aacagtaatcatgttcagttggaaaagtatcgtatggggatgaagggtccgtatgccctt
tcctttagccggtctgatatccccaaggggggctcaagcatggatacgacattcttcaag
gacctctcgatccccaactacgttcccccttcagcccgaggcacagtgacaggaaaagca
acaggggtaagctcaaccgcccaagcagtcgtccactggtacaacgacgcagcccaatac
tgggcctacgcctcttcttcttctggaaccttcacctcccccgccatgaaaccggggact
tacactcaagtcctataccaaggcgaattcaaagtaaaagccatcagtgtcatggtaaca
gctggcagcacgacaacggccaacatagccgccgataccgagcccaaaacctcgctgtgg
cgcatcggcgaatgggacggccagcccaagggcttccgcaacgcagacaagcaactccgc
atgcatccctctgattcgcgcatggcgccctgggtccccctcacctacaccgtgggcacc
agcaccctcgacagcgtgcccatggccctcgtcaaggacctcaaccccctcaccatcaac
ttcacctccaagcaaaagaacacggcggcacttagcctgcgtgtgggcactaccctcgcc
tttgccggctgccgtcccgctgtgacgctgaatactaatttcagtcccgccgtgcctgcg
gcgccgacaaagattgcgtcgcggggtttcacgcgaggcgcgtaccgtgggtttggcgag
gtgtacgattacgctatccctgctggtacgctggtcgagggcgccaatacgattcgtatc
agctgtttgagcggtgagtctgggacaggcttcttggctcccaatgtcattctcgatgcg
atagagttgttggagtga
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