KEGG   Bipolaris oryzae: COCMIDRAFT_108152
Entry
COCMIDRAFT_108152 CDS       T03125                                 
Name
(RefSeq) hypothetical protein
  KO
K06634  cyclin H
Organism
bor  Bipolaris oryzae
Pathway
bor03022  Basal transcription factors
bor03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bor00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    COCMIDRAFT_108152
  09124 Replication and repair
   03420 Nucleotide excision repair
    COCMIDRAFT_108152
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bor03021]
    COCMIDRAFT_108152
   03400 DNA repair and recombination proteins [BR:bor03400]
    COCMIDRAFT_108152
Transcription machinery [BR:bor03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     COCMIDRAFT_108152
DNA repair and recombination proteins [BR:bor03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     COCMIDRAFT_108152
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N
Other DBs
NCBI-GeneID: 19119192
NCBI-ProteinID: XP_007692791
JGI: Cocmi1_108152
UniProt: W6YYS8
LinkDB
Position
Unknown
AA seq 423 aa
MKLTEDDLYRNSTQYRNWSFTRAQLAEKRLRINLQATERVKANLARVRAQRAQDAVDSDA
APPGADKENASGANTPNSGMQTTTEVNCLTAEEELTVVNEFCERAIALGNHYSFPLNVVA
TCIQFMRRFYLYNSPMTYHVNTILRTIMFMATKIELFNIHVSQYAEGAGRNVTTEDVLAP
EYIIMQGLRYNLDVRHPFRALKAGHMELLEMVHGKYQGPVQDMTPKEVQNKILSLPTKTG
GTAIKMPEKKVEERIHAAYGTATNTLRTIAVLTDAYFLYTPSQIWLSAHLLADEPLTLFY
LSTKLPQSHPHHAKLLSTLRSCASLISSHRLYVNATLPAAERDAREAKHKAEVKALVQKL
KNCRDPDKVDLVKLNQAQKRDAVQGDALEESKAKRRKLAREGYEKESDAFWGPELVKSDK
TEK
NT seq 1272 nt   +upstreamnt  +downstreamnt
atgaagctcaccgaagacgacctctatcgcaactcgacacagtatcgaaactggtccttt
actcgcgcacaactcgccgagaaacgtctaaggatcaacctccaggccactgagcgcgtc
aaggccaaccttgcccgagtgcgagcgcagcgcgctcaggatgctgtagacagtgacgct
gcgccacctggcgcggacaaggaaaatgcgagcggggcaaatactcccaattcaggcatg
cagacgacgacggaggtcaattgtctgactgccgaagaggaactcaccgtggtcaatgag
ttttgcgaacgcgccatcgcactaggaaaccattacagttttccattgaacgtagttgca
acatgtatccaattcatgcgccgcttctatctctacaactcgcccatgacctaccacgtc
aacaccatcctgcgtaccatcatgttcatggccaccaagattgagctcttcaacatccac
gtctcacagtacgcagaaggcgccgggcgcaatgtgacgactgaagacgttctcgcaccc
gaatacatcatcatgcaaggattgcggtacaacctcgacgtacgccaccctttccgcgcc
ctcaaggccggccatatggaactgctggagatggtgcacggaaagtaccaggggcccgtc
caggatatgacaccaaaggaagtgcagaacaagattctctcactacctaccaagactggc
ggtacggctatcaagatgccagagaagaaggttgaagagcgaatccacgcagcatacggc
accgcgacaaacacactacgtaccatcgctgtgctcacagacgcatacttcctctacacg
ccatctcaaatctggctctcagcccacctcctcgcagacgagcccctcaccctattctac
ctttcaaccaaactcccgcaatcacatccccatcacgccaaactcctatctactctgcgc
tcatgcgcttccctcatctccagccaccgcctatacgtcaacgctacgctccccgccgct
gagcgtgacgctcgggaagcaaaacacaaagccgaagtcaaagccctcgtgcaaaaattg
aagaactgccgggacccagacaaggtcgatttagtaaaattgaatcaagctcagaagaga
gatgcagttcaaggcgatgcgctagaggaaagtaaagcaaagaggagaaagcttgcgaga
gagggctacgaaaaagagtctgatgcgttttgggggcctgaattagtcaagtcagacaag
acggagaagtag

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