Bipolaris oryzae: COCMIDRAFT_108236
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Entry
COCMIDRAFT_108236 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bor
Bipolaris oryzae
Pathway
bor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
COCMIDRAFT_108236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bor03400
]
COCMIDRAFT_108236
Enzymes [BR:
bor01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
COCMIDRAFT_108236
DNA repair and recombination proteins [BR:
bor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
COCMIDRAFT_108236
Prokaryotic type
COCMIDRAFT_108236
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
19119208
NCBI-ProteinID:
XP_007692829
JGI:
Cocmi1_108236
UniProt:
W6YMZ0
LinkDB
All DBs
Position
Unknown
AA seq
319 aa
AA seq
DB search
MSLKRKAAAAATDASKKTKQNGSITAFFGPPKTDPNAPPKQTAAAAKFDKDAWVAKLTDE
QKDLLQLELDTMHESWLPHLKDVLVTPQFLQLKRFLKQELASGKTVYPPMKDVYSWSRHT
PLNTVKVVITGQDPYHGPNQAHGLCFSIRPPNPAPPSLQNIYKALKKEYPDYQPPPNKGG
LLIPWAERGVLLINTCLTVRRGEANSHSGKGWELLMQKVIDTVAKVRTNGVVFLAWGTPA
QQRTKGIPVDKHLVLKSVHPSPLSAARGFFDCGHFTKCNEWLVQRYGKGGGIDWDLNVKP
EKEKGKEEKKENEKKEEKE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgagtctaaaacgcaaagccgccgctgcagctaccgacgcgtccaagaagactaagcag
aacggcagcattactgccttcttcggcccacctaagaccgaccccaatgcaccccccaag
cagacagctgcagctgcaaagtttgacaaagatgcctgggttgccaaactcaccgatgag
cagaaggacctgttgcagctcgagctcgataccatgcacgagagctggctgccgcatctc
aaggatgtacttgtaacgccccagtttctgcaactgaagcgtttccttaaacaggagctg
gccagcggcaagacggtgtatccaccaatgaaagatgtttactcatggtcgcgacacaca
ccgctcaacacggtcaaggtagtcatcacaggccaggacccttaccacggccctaaccaa
gcccatggcctctgcttctccatccgaccgccaaaccctgccccaccctcgcttcagaat
atctacaaagccctcaagaaggaatacccagattaccagccgccgccaaacaagggtgga
ttgctgattccatgggctgagcggggcgtgttgctcatcaacacctgcctaactgttcgc
agaggcgaagcaaactcgcattctggcaaaggctgggaactgctcatgcaaaaggtcatt
gataccgtggccaaggtgcgaaccaacggtgtcgtttttctggcctggggcaccccggcc
caacagaggacaaagggtattccagtggacaagcatcttgttctcaagagcgtgcacccc
agcccgctgagtgcagcgaggggattctttgactgcgggcattttactaaatgcaatgaa
tggcttgttcagagatatggaaagggcgggggcattgattgggatctcaatgttaaacct
gaaaaagagaagggaaaggaagagaagaaagaaaacgaaaagaaagaggaaaaagaatag
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