Bipolaris oryzae: COCMIDRAFT_108447
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Entry
COCMIDRAFT_108447 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
bor
Bipolaris oryzae
Pathway
bor03015
mRNA surveillance pathway
bor04111
Cell cycle - yeast
bor04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
COCMIDRAFT_108447
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
COCMIDRAFT_108447
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
COCMIDRAFT_108447
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bor01009
]
COCMIDRAFT_108447
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bor03019
]
COCMIDRAFT_108447
03036 Chromosome and associated proteins [BR:
bor03036
]
COCMIDRAFT_108447
Protein phosphatases and associated proteins [BR:
bor01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
COCMIDRAFT_108447
Messenger RNA biogenesis [BR:
bor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
COCMIDRAFT_108447
Chromosome and associated proteins [BR:
bor03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
COCMIDRAFT_108447
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_IFT122_1st
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WDR55
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
19119246
NCBI-ProteinID:
XP_007692909
JGI:
Cocmi1_108447
UniProt:
W6YMR5
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MVEAEGNPTTWKFTQCFGDKGDVEDITEADIISTVEFDQTGNYLATGDKGGRVVLFERNE
TKKTCEYKFHTEFQSHEPEFDYLKSLEIEEKINKIKWCRRQNASHYLLSTNDKTIKLWKV
FEKSLKVVAENNLSHELTPGGGVAGGGGPVRNPNAQFRSATDLKLPRLTHHDTVVAAVPR
KTYANAHAYHINSISVNSDGETFISSDDLRINLWNLNIQDQSFNIVDIKPANMEELTEVI
TAAEFHPISCNWFMYASSKGTIKLADMRESALCDQHAKQFEQEEDPSSRSFFSEIISSIS
DVRFSHDGRYILSRDYLTVKIWDVNMEKTPVKTIPIHEHLRPRLCDTYENDSIFDKFEVV
FSGDAKNVMTGSYNNNFMIYPSDNDKDTEVVLQADKSAFKAKKVGIPTPMNSSGSPTGSN
AGKKGGSRAGSPAAGAIGQGQRMRKETDADQIDFNKKILHMSWHPFEDSIAIAATNNLFV
FSAL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggtagaagcagaaggaaaccccacaacgtggaaattcacccagtgctttggcgacaaa
ggcgatgttgaggatataaccgaagctgacatcatctccaccgtcgagttcgaccagacg
ggtaactaccttgcaaccggtgacaagggtggtcgtgtggtcttgttcgaaaggaacgag
acgaaaaaaacctgcgaatacaaattccacaccgagttccaatcgcacgagcccgagttc
gactacctaaaatctctcgagatcgaggaaaagatcaacaagatcaaatggtgccgccga
caaaacgcctcacactatctgctttccacaaacgacaagaccatcaaattatggaaggta
tttgagaagtcgctgaaggtagtggcagagaacaatctgtcacacgagttgacgcctgga
ggtggggttgctggtggcggcggtcccgtcaggaacccaaatgcacagttccgcagtgcc
acggacctgaagctcccccgacttacacatcacgataccgtagtcgcagcagtaccccga
aagacgtatgccaatgcgcatgcataccatatcaatagcatatctgtaaacagtgacgga
gagacgttcattagtagcgacgatctgcggatcaacctctggaacctcaacattcaggac
cagagcttcaacattgtcgacatcaagccagcgaacatggaggagcttacagaggtcatc
acagctgccgagtttcaccctatcagctgcaactggttcatgtatgcgagctccaaggga
acgatcaagctcgctgacatgcgtgagagtgctctgtgcgaccagcatgcaaagcagttt
gaacaagaagaagacccctcatcaaggtctttcttctccgaaatcatttcatccatctct
gacgtacggttctcacatgacggacgatacatcctgtctcgcgactacctgactgtcaag
atctgggatgtcaacatggagaagacaccagtcaaaacgatccccattcatgagcacctg
cgacctaggctatgcgacacatacgaaaacgacagtatttttgacaagttcgaggttgtg
ttctctggagacgcaaagaatgtcatgactggtagctacaacaacaacttcatgatatat
ccttcagataacgacaaagataccgaggttgtgctacaagctgacaagtctgcgttcaaa
gcaaagaaggttggaatcccgacgccgatgaactcatcaggcagcccgactggcagcaac
gccggtaaaaagggcggatcaagagctggtagccctgctgccggtgctattgggcaaggt
caacgcatgaggaaggaaaccgatgcggatcagattgacttcaacaagaagattttgcac
atgagctggcatccgttcgaggatagcattgctatagcagcaacaaacaatcttttcgtc
ttctcggcattgtaa
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