Bipolaris oryzae: COCMIDRAFT_1319
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Entry
COCMIDRAFT_1319 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K14848
ribosome assembly protein RRB1
Organism
bor
Bipolaris oryzae
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bor03009
]
COCMIDRAFT_1319
Ribosome biogenesis [BR:
bor03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
COCMIDRAFT_1319
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
CAF1C_H4-bd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
ANAPC4_WD40
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_NUP159_NUP214
PDS5
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
19119840
NCBI-ProteinID:
XP_007683486
JGI:
Cocmi1_1319
UniProt:
W7A1K1
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
MAKRAAESEQELEAIKNGERPMEVDAQNEAGEFEDEFEDEFESEDEILEAGVDGRPDEER
EAEERENGMDIDKGTFIPGRHKLSPGETLNPDLSTYDMLHTLEAPWPCLSCDIVPDNLGS
DRKTYPATVYAVAGTQAARGRDKENQIMVMKMSSLSRMEKEDEEDEDSDSDDEASDPILE
TKSIPLTSCTNRIRAHQTPQATSAQPPTTLTAAMTESGQVLIHDVTPHLTSFDTPGTTIS
PAQNKPVCTIRAHGSNEGYALDWSPLIPEGKLLTADCAGKIFATTRTQGGGFVTDTTPYT
GHQGSVEELQWSPTEKTVFSSASSDGTVKIWDTRVKSRKPVLSVQASKTDVNVLSWSHQT
AHLLASGADDGEWAVWDLRQWKPSTDMSSDKKPSPVASYTFHKEQITSVEWHPTDDSIVL
VCAGDNTLTLWDLAVELDDEESKYTAGVQDVPPQLLFVHYMEQIKEAHWHPQIPGAIMAT
GGSGFNVFKTISV
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcgagcggcggaatcagagcaagagctggaggctatcaagaatggcgagcgg
cccatggaagttgatgcccagaacgaggcaggcgaattcgaagacgagtttgaggacgaa
ttcgagagcgaggatgagattctcgaggcaggagtagacggacgaccagatgaggagcgc
gaggccgaagagcgcgagaatggaatggatatcgacaaaggcacatttattcctggacgc
cacaaactctcccctggcgagacgctgaaccccgatctttcgacatacgatatgctgcat
accctagaagcgccatggccatgtctgtcttgcgacattgtacccgacaacctaggctca
gatcgcaaaacataccccgcgaccgtatacgcagtcgccggcacacaagcagcacgggga
agggacaaggagaaccagatcatggtcatgaaaatgagcagtttgtcgcgcatggagaag
gaagacgaggaagatgaggactcggattcggatgacgaggcatccgatcccatattggag
accaagtcgataccattgacgagctgcacgaaccgtatacgagcacaccaaacaccacaa
gccacatctgcccaacctccaacaactctcacagctgccatgacagagtcaggtcaggtt
ctcattcacgacgtcaccccacatctcacctctttcgacacacccggcaccaccatctct
cccgcgcaaaataagccagtctgcaccatccgagctcacggatcaaacgagggttatgcg
ctagactggtctcccctgataccagaaggaaagcttcttacggctgattgcgctggaaaa
atatttgccacaaccaggacgcaaggtggaggctttgtgactgacaccacaccttatacc
ggccatcaaggctcagtcgaggagctgcaatggtctccgactgagaagactgtgttttct
tcagcgtcaagcgatggtacagtcaagatctgggatactcgagttaaatcacggaaacca
gtactcagtgtccaggcctccaagactgatgtcaacgtactcagctggtcgcatcagacc
gcccatcttcttgcttctggtgccgacgatggcgagtgggcagtctgggacttgcgacaa
tggaagccgtccaccgacatgtccagcgacaagaagccttcgcccgtcgcatcttacaca
ttccacaaagagcaaatcacctctgtcgagtggcaccctacagacgacagtatcgtgctt
gtttgcgccggcgataacacgctcacattgtgggatctcgctgtcgaacttgatgatgag
gagagcaaatacacagcaggcgtgcaagacgtgccgccacaactgctctttgtgcactac
atggagcaaatcaaggaggcacactggcacccacagattccgggcgctatcatggctacg
ggcggatcaggattcaacgttttcaagacgattagcgtataa
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