Bipolaris oryzae: COCMIDRAFT_1393
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Entry
COCMIDRAFT_1393 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K10609
cullin 4
Organism
bor
Bipolaris oryzae
Pathway
bor03420
Nucleotide excision repair
bor04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
COCMIDRAFT_1393
09124 Replication and repair
03420 Nucleotide excision repair
COCMIDRAFT_1393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bor04121
]
COCMIDRAFT_1393
03400 DNA repair and recombination proteins [BR:
bor03400
]
COCMIDRAFT_1393
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bor04147
]
COCMIDRAFT_1393
Ubiquitin system [BR:
bor04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
COCMIDRAFT_1393
DNA repair and recombination proteins [BR:
bor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
COCMIDRAFT_1393
TCR (transcription coupled repair) factors
Cul4-CSA complex
COCMIDRAFT_1393
Exosome [BR:
bor04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
COCMIDRAFT_1393
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Hint
Motif
Other DBs
NCBI-GeneID:
19119856
NCBI-ProteinID:
XP_007683502
JGI:
Cocmi1_1393
UniProt:
W7A1S7
LinkDB
All DBs
Position
Unknown
AA seq
879 aa
AA seq
DB search
MSANSSALKRKHSGKTIKELFTTHSKPNLASAAPLSPTSKRTRRDSSPIESTEVATPPSL
ISSMDTADMYSFPSKKTGIPSNANVVHVTSSPENSPAKMSGQRNGTRKAAPNLHGNSGPK
RLVVKNFKPIRKVDPRAFLDQTWQKVEKALDTIFDQGDIDFSLEELYRGVENVCRQDMAR
DIKERLTTKCRDYVRGSLGAKVKDSLGKTSVDVLRTTLYAWALWNSQMKYLDWIFCYLDR
AYLLPRHESLREICISLFRSIIFENDKLSPRIVDGACDLVATDRTGGDLDSEMFSKTVNM
FHDMQVYTRHFEPRLMEVSQEYIVKWADTESAERSLPEYVRNSRALMDREMKRVEMFSLP
NTTKRELLTLLEDHLIAKKESRLTNQDELADLLEANAVQDLEMLYTLLERRKMGARLRSG
FTKWIEDEGTAIVFNEKEQDNMVVHLLSLKRQLDAIWKTSFHRDEELGHGLREAFDKFMN
KTKKTNASWGTDNSKTGEMIAKYVDMLLRGGAKAIPTQLSRKSEKPAEVEVEDDKEDDVF
DEDTEVNNQLDQVLDLFRFLHGKAVFEAFYKKDLARRLLMGRSASADAERSMLSRLKIEC
GAGFTANLEQMFRDIELSREEMSSYKNVSEERNEKLDLDLNVNILSASAWPTYPTVPVIL
PPEVQSAMNKFEAHYKIKHTGRKLEFKHALAHCQIKARFPKGLKELVVSSFQAIVLLLFN
GRRDDEHIDYEYLKQATGLPPAELNRTLQSLACAKVRPLTKHPKGREISETDTFTINASF
TDPKYRIKVNTVQLKETAAENKETHERVAADRNYETQAAIVRILKARKRISHAELVSETI
KATRNRGTLEVSGIKRNIDRLIEKEFLEREDDGLYAYIA
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccaattcaagcgcgctgaaacggaagcactcgggcaagaccatcaaggagctc
ttcaccacccactccaagccaaaccttgcctcggcagctccgttatcgcccacaagcaag
cgcacacgacgagacagctcgcctatagagagcacagaggttgccactccgccctctttg
ataagcagcatggacacagccgatatgtacagctttcccagcaagaagacaggcatacct
agtaatgcaaatgtcgtccatgtcacctcgagccctgagaacagccctgcgaagatgagc
ggccaacgcaatggaacgcgcaaggcagcacccaacttacatggcaatagcggccccaag
cgactggtggtgaagaatttcaagccgattagaaaggtggacccccgtgcttttctggac
cagacatggcagaaggtcgaaaaggccctggacaccatctttgaccaaggtgacattgac
tttagtctggaggagctgtaccgcggcgtagaaaatgtctgtcggcaggacatggcaagg
gacatcaaagaacgtctaaccaccaagtgccgagattacgtgcgaggcagtttaggggca
aaggtaaaagacagcctgggtaagactagtgttgatgtactgcgaacgacactatatgct
tgggcactatggaacagccagatgaaatacctagattggatcttctgctacctcgaccga
gcctacctcctcccacgtcacgaatctctccgcgaaatctgtattagccttttccgctca
atcatctttgaaaacgacaaactaagccctcgcatcgttgatggtgcctgcgatctggta
gcaactgatcggacgggtggtgatctggacagcgaaatgttctctaagacagtcaatatg
ttccacgacatgcaagtctacacgcggcactttgaaccgcgcttgatggaggtcagccag
gaatacatagtgaaatgggcagacacggagagtgcagagaggtccctgcccgagtatgtg
cgcaattcaagggcactcatggaccgtgaaatgaagagggtagagatgtttagccttcca
aacacgaccaagagagagcttcttacgctgctggaagatcatttaatcgcgaagaaggag
tcgagattgacgaatcaggacgagcttgctgacctcctggaagctaatgctgtccaagat
cttgagatgctatacacacttctcgaacgacgaaaaatgggcgcacgtctacggtctggt
tttacaaagtggatagaagacgagggtacagctatcgtcttcaatgaaaaggaacaagac
aacatggttgtacacctgctttcactgaagcgtcaattagatgctatttggaaaacatcg
ttccatcgagacgaagagctgggccacgggctgcgcgaggcttttgataagttcatgaac
aagacaaagaagacgaacgcaagctggggcacagacaactccaagacgggcgagatgatt
gccaagtacgtcgacatgttgttgagaggaggcgccaaggcgataccaacacagctgagt
cggaagtcagagaagcctgctgaagttgaggttgaggatgacaaggaagatgatgtgttt
gatgaagataccgaagtcaacaaccaacttgaccaggttctcgatctgttccgcttctta
catggcaaggctgtttttgaggccttttacaagaaagatctagcacgacgattgttgatg
ggcagaagcgctagcgcggatgctgagagaagcatgttatcaagactcaagattgaatgt
ggtgctggtttcactgccaaccttgaacaaatgttccgagacatcgaactgtcccgcgaa
gaaatgagctcatacaagaatgttagcgaggaacgcaacgaaaaacttgatcttgatctg
aacgtcaacatcctttctgcatccgcctggcctacttaccccactgttcccgtcatccta
ccgccagaggtccaatctgctatgaacaaatttgaagcacactacaagatcaaacacact
ggccgcaagcttgagttcaagcacgcactggcgcattgtcaaatcaaggccagattccca
aaaggcctcaaggaactggtagtctcgtcattccaggccattgtactcttgctgttcaat
ggccgacgagatgacgagcacattgattatgaatatctcaagcaagccacaggactaccc
cctgctgagcttaatcgtacattacagtctctcgcctgtgccaaagtgcggcctctaacg
aagcatccaaagggccgggagattagtgagactgatacgtttactatcaacgcttctttc
acagatcccaagtaccgcatcaaagtcaacactgttcagctcaaggaaacggcggctgaa
aacaaggaaacacacgaacgagttgctgcggaccgaaactatgagacgcaagccgccatt
gtgcgcattttgaaggcaagaaagaggatcagtcacgccgagctagtcagtgagactatc
aaggctacaagaaacaggggtactctagaggttagtggtatcaagaggaacattgatcgg
ttgattgagaaggagttcttggagagagaagacgatgggttgtatgcctacattgcatag
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integrated database retrieval system
