Bipolaris oryzae: COCMIDRAFT_21682
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Entry
COCMIDRAFT_21682 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
bor
Bipolaris oryzae
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bor03036
]
COCMIDRAFT_21682
Chromosome and associated proteins [BR:
bor03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
COCMIDRAFT_21682
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
DUF5884
Motif
Other DBs
NCBI-GeneID:
19120104
NCBI-ProteinID:
XP_007682526
JGI:
Cocmi1_21682
UniProt:
W6ZLL3
LinkDB
All DBs
Position
Unknown
AA seq
1184 aa
AA seq
DB search
MYRRDPIVSSSPPPPVGSRATSHSDDDDDDQQDPYVTQPTQILAEHSPFFPAPSDTTQPT
QPTQILTPRANRVQNTASSQLQVPRSSPTIQRYSSPVMSPTQSQRPYGGYSNPMAPPGTS
FFPPQAVRKPIVDLTSDDPPVERDPDEDESEYRSNIPLSKIEMGSMASRIEETPQKPTWD
LSGFKYNGDQSRKRPSEGPASSSPPKRQKPLPRQGGPSRALPVDLTEDSNMTLEDITDFA
MQRNVKRLQAIYPNRSVKQLHEALLKKKGEFSDACSYLAEEESEDELLRSPQLGVAQSKS
IPIVKKTAQRGLKQPVQSLQNKYSKLGATQNSPVVIDSPEKEAPKRKGRLVSGRDRKPKM
AFSSSPEPAPRPQQHSKKQAPIMVSSDEDEGIDAELVIDDDSEASAAPENNFSDDALLNF
FNTCTVEAMVDLSSHKEEDIKEIFKERPFASLDAVRNIHVDLAPAEKSKKKARKPRITTG
ARLVESTEGMWNAYSTIDSVVKQCEALGKPMVAGMARWGIDIFGASTEEGMDVTSLDDSD
TNSARDSGYHTPKSSNSSDTESKGIRKAVGRTKLLKQPSIMNDDIELKDYQVVGLNWLNL
LWQTETSGILADDMGLGKTCQIIAFLSHLKEEGSGKPALIVVPGSTLENWCREFERFSSS
INFTPYYGSQAERFSHQESIHQNIRQGTCDAIITTYDLTFRKEDLIFLKKCRPEICIFDE
GHMLKNANTIRYKSLMKIPTKCRILLTGTPLQNSLQELMSILGFLMPQVFYGDQQEEVQE
MLQILFKHKAKTMESDSHSSLLSAQRIQRARTMLTPFILRRKKAQVLKHLPKKTSRVEYC
ELTDTQRTLYNEQLAKQRKILEDRAAGIAVKDHANVMMKLRQAAIHSLLFRHRYDNNTIR
KMSKACLKEDMFAESNPDIIYEELELYQDYQCHQLATKYRALKKFELQNHEWMDSGKVTA
LLALLKKYKENGDRALVFSQFTSVMDILGWVFDDHDINFMRMDGSTPIQERQSLMDIFYQ
DESIQLFMISTKSGGAGINLACANKVIIFDSSFNPQDDIQAENRAHRVGQTREVEVVRLV
TKGTVEEQIYALGISKLELDKMVQGEDEGAPKTKGKKKDEPGAAGAAALSKAEEAGMAAV
EMMMMQQLQSPPDDKKKKKSGGATADIKEQFLSGLKSAGLDVAA
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgtcgcgaccctatagtctcttcatcgcctcctcctcctgtcggatcacgcgct
acttcgcatagcgacgacgacgacgacgaccaacaggatccttacgtcactcagcctacg
caaattctcgctgaacactcacccttcttcccagcgccttctgataccacacaacccacg
caacccacacaaatcctcacaccgcgcgcgaaccgagtccaaaacacagcctcctcgcag
ttgcaagtcccccgctcgtctcccactatccagcggtactcgtcgcccgtcatgtcgcca
acccagtcgcaacggccgtatggaggctacagcaacccaatggcacctcctggtacaagt
tttttccctccgcaagccgttcgcaagccaatagtcgatttgacatcggacgacccccct
gtcgaacgcgatccagacgaagacgagtctgagtacaggtctaatataccactgtcaaaa
atcgaaatgggctccatggcgtctaggattgaagagacgccacagaaaccaacgtgggat
ctatccggattcaagtacaatggtgaccagtcgcgaaaacgaccgtctgagggacctgcc
tcgagttcgccaccgaagagacaaaagcccctaccgcggcaagggggaccttcgcgcgct
ctgcctgtggatttgacagaagattcaaacatgaccttggaggatataacagactttgcc
atgcagcgcaacgtaaagcggttgcaggccatatatccgaatcgctcggtgaagcagcta
catgaagccctacttaagaagaaaggcgaattttcagatgcatgttcgtacttggcagaa
gaggagtctgaggacgagttgcttcggtccccacagcttggagtggcccaaagcaagtca
ataccgattgtaaagaagaccgcacagcgtggtttgaagcagcctgtgcagtcattacag
aacaaatattcaaagttgggagcgactcagaacagtcctgtagtgattgacagtcccgag
aaggaagcaccaaaacggaaaggcagacttgttagcggaagagatcgcaagccgaagatg
gcgttttcgtcctcaccagaacccgctccacgaccgcaacaacattcgaagaagcaagcg
ccaattatggtctcttcagatgaggatgagggtatcgatgcagagcttgtgattgatgac
gactccgaggcaagcgcagctccagagaacaacttcagcgacgatgcattgttgaacttc
ttcaacacttgcactgtggaggctatggtggacttgtcgagtcacaaggaagaagacatc
aaagagatattcaaggaacgcccgttcgcctcgcttgatgctgttcgaaacattcacgta
gacctcgcaccagccgagaaaagcaagaagaaggctcgaaagccgcgtatcacaacaggt
gcaaggcttgtggaatctactgaaggcatgtggaacgcctactcgaccattgactcggtg
gtgaaacaatgtgaagcccttggaaaaccaatggttgcgggcatggcacgatggggaatc
gacattttcggcgcatctactgaggaaggcatggacgttacgagtctcgacgatagcgat
accaactcagcacgggattccggttatcatacaccaaagagcagcaacagcagcgatacc
gaatccaagggcatacgcaaagcagtcggtcgtacaaagctgctcaaacagccctcgatc
atgaatgacgacattgagctcaaggactaccaagtcgtcggtcttaactggctcaatctt
ctctggcaaactgagacctctggcattctggctgacgacatgggtttgggaaaaacctgc
cagatcattgctttcttgtcgcatctgaaagaagagggtagcggaaagcctgcactcatt
gttgtacctggatcgactctagagaactggtgtcgtgagtttgagcgcttttcaagctcc
atcaacttcacaccatactacggatctcaagctgaacgtttctcgcaccaggagagcatt
caccagaacatcaggcagggaacgtgcgacgcaattatcacaacgtacgatctcacattc
aggaaagaagacctaatctttctcaagaaatgcagacctgaaatctgcatttttgacgaa
ggacatatgctgaagaatgctaacacgattcgatacaagagcttgatgaagattcctacc
aagtgcaggattctattgactggcaccccgctgcagaacagtctccaagaactcatgtcc
attcttgggttcttgatgccgcaggtgttctacggcgatcagcaggaggaagttcaggag
atgttacaaatattgtttaaacacaaggctaagactatggagagcgattcgcacagctct
ttgttgtctgctcagcgtatccagcgtgctcgtaccatgttgacaccctttattttgagg
aggaagaaggcccaggtgctcaagcacctgccgaagaagacttctcgcgtcgaatactgt
gagctcacagatacacaaaggaccctgtacaacgagcaattagcgaagcagcgcaagatt
ctcgaggacagggctgccggcatcgctgtcaaagaccatgccaacgtgatgatgaagctt
cgccaagcagccatccactcactcctgttccgtcatcgctacgacaacaataccatccgg
aaaatgtcaaaggcctgtctcaaagaagacatgtttgctgaaagcaacccagacattatc
tacgaagagctggagctctaccaagactaccaatgccaccaactcgccaccaagtaccga
gcgctcaagaagttcgagctccaaaaccacgaatggatggactcgggcaaagtcactgct
ctcctcgccctgttgaaaaagtacaaagaaaacggcgaccgcgccctagtctttagtcaa
ttcacctctgtcatggacatcctcggctgggtcttcgacgaccacgacataaacttcatg
cgcatggacggctccaccccgatccaagagcgccaatccctcatggacatcttctaccaa
gacgaatccatccagctcttcatgatcagtaccaagagcggcggtgcgggtatcaatctc
gcctgcgcaaacaaagtcatcatctttgactcgagcttcaacccccaagacgacattcaa
gccgagaaccgtgcccaccgcgttggccagacgcgcgaagtcgaagtcgtcagactcgtc
accaaggggaccgtcgaagaacagatttacgccctcggcatcagcaagttggagctggac
aagatggtccaaggtgaagacgagggcgcgccgaaaactaaagggaagaagaaggatgag
ccgggggctgcgggtgcagcagcgctgagtaaagccgaagaagcgggtatggcggctgtc
gagatgatgatgatgcagcagttgcagtcgccgcctgatgacaagaagaagaagaagagt
ggtggtgctacggcggatatcaaggagcagtttctctccggtctcaagagtgcggggttg
gatgtcgctgcgtag
DBGET
integrated database retrieval system
