Bipolaris oryzae: COCMIDRAFT_23011
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Entry
COCMIDRAFT_23011 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K03135
transcription initiation factor TFIID subunit 11
Organism
bor
Bipolaris oryzae
Pathway
bor03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
COCMIDRAFT_23011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bor03021
]
COCMIDRAFT_23011
Transcription machinery [BR:
bor03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
COCMIDRAFT_23011
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAFII28
Spt5_N
GMT-wHTH
PGA2
Motif
Other DBs
NCBI-GeneID:
19120362
NCBI-ProteinID:
XP_007684069
JGI:
Cocmi1_23011
UniProt:
W6ZHG3
LinkDB
All DBs
Position
Unknown
AA seq
329 aa
AA seq
DB search
MSSNRKRGSISSHSGAPAKKRKPSNLRNAFSPDAESIGGSPRQYSRSPSVESNITTSVIN
GVGGSKKRRKKGGDGGSVAGSSVRGGKGGDGRSAVGGEDEGEEEDDDEDEMGEEMGMEIE
GGMSVEARRKQEKEYERMLEDFMTPAQMDRYATYRRIRLKRETVRKLVNQTLSQSVPQPI
IIAVTSYSKTFIGELIDRALTVRDEWSAVRTHLPNPDLPGPILSQSLGRPSAHIKDERNK
PTNTDIQSAGWYLNQVDRTQSIWKEVDKNASLQERLRACDKGPLTPAHLREALRRYKRDR
DGGGAGFAGMSLEGVERTMGRTGGKRLFK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaaccgcaagcgtggcagcatatcttcgcactcaggtgcaccagctaagaag
cgcaagccctctaatcttcgcaatgccttttctcccgatgccgaatccatcggtggctcg
ccacgccaatactcgcgttcaccatcggtcgaaagcaacatcaccacttcagttatcaat
ggtgttggaggtagcaagaagcgccgtaagaagggcggcgatggtggaagcgtcgcaggc
tcgagcgtaagaggaggcaaaggtggcgatggaaggagtgcagttggcggcgaagatgaa
ggagaagaggaagacgacgacgaagacgagatgggcgaggaaatgggcatggagattgaa
ggcggaatgagcgtcgaagcccgacgcaaacaagaaaaagaatacgaacgaatgctagaa
gactttatgacccccgcgcaaatggaccgctacgcaacctaccgtcgcatccgcctcaag
cgcgaaaccgtccgcaaactcgtcaaccaaaccctctcgcaatccgtgccccaacccatc
atcatcgccgtaacttcctactccaaaaccttcatcggcgagctcatcgaccgcgccctc
accgtccgcgacgaatggtccgccgtacgcacccacctgcccaacccagacttgccaggc
cccatcttaagccagagcctgggaagaccgagtgcgcatatcaaagacgagcggaataaa
ccgacgaatacggatatccagagtgcggggtggtacttgaatcaggtggatcgcacgcag
agtatatggaaggaggtggataagaatgcgagtttgcaggagcgattacgggcttgtgac
aaggggccgttgaccccggcacatttgagggaggcgctgcggagatacaagagggatagg
gatggtgggggtgcgggttttgcgggtatgagtttggagggtgtggagaggacaatgggt
aggacaggtgggaagagactgttcaagtga
DBGET
integrated database retrieval system
