Bipolaris oryzae: COCMIDRAFT_2316
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Entry
COCMIDRAFT_2316 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K13201
nucleolysin TIA-1/TIAR
Organism
bor
Bipolaris oryzae
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bor03019
]
COCMIDRAFT_2316
03041 Spliceosome [BR:
bor03041
]
COCMIDRAFT_2316
Messenger RNA biogenesis [BR:
bor03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
COCMIDRAFT_2316
Spliceosome [BR:
bor03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
COCMIDRAFT_2316
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
RRM_7
RRM_PARP14_3
RRM_8
Motif
Other DBs
NCBI-GeneID:
19120383
NCBI-ProteinID:
XP_007684593
JGI:
Cocmi1_2316
UniProt:
W6ZAS7
LinkDB
All DBs
Position
Unknown
AA seq
488 aa
AA seq
DB search
MADQQNPGAQLPPPPSASGAPGYDNQPQAQQHMPPPPLAPVIIPQNNNPIPTAISSPMSG
NPMSPTSGQPGYVPRRAAPEPNKRALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKT
ASSPSFNSKGFNYGFVEYDDPGAAERGMATLNGRRIHNNEIRVNWAYQSNNTAKEDTSNH
FHIFVGDLSNEVNDEVLLQAFSTFGPVSEARVMWDMKTGRSRGYGFVAFRDRADAERALN
SMDGEWLGSRAIRCNWANQKGQPSISQQQAMASMGMTPTTPFGHHHFPTHGVQSYDMVVA
QTPQWQTTCYVGNLTPYTSQADLVPLFQNFGYVTETRFQSDRGFAFIKMDTHENAAMAIC
QLNGYNVNGRPLKCSWGKDRPPTGQFEGYSPAGGPNSAYPQTPSAYFPQYGGGPQGGPMS
PSGPSPGGAPFAQQQQQQAFGNPGMPFQQQMQQPGSAGGYGRGAPQQPQWGQSPQAAFSQ
NGFGGYQG
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccagcagaaccctggggcacagctcccccctccgccctccgccagcggtgcg
cccggctacgacaaccagcctcaggcccagcagcacatgccgcccccgccgctcgccccc
gtcatcatcccgcagaacaacaatcccattcccacggccattagctcccccatgtcgggc
aaccccatgtccccaaccagcggccagcctggctacgtgccccgtcgcgcggcgcccgag
cccaacaagcgcgccttgtatgtgggaggactcgacccgcgggtcactgaggacgtgctt
cgtcaaatcttcgagaccactggacatgtccagagtgtcaagatcatccctgacaagact
gcaagttctccttctttcaactccaagggtttcaattacggcttcgttgagtacgacgac
cccggtgcggccgagcgtggcatggccaccctcaatggccggcgcattcacaacaatgaa
attcgtgtaaactgggcctaccaatctaacaacacagccaaggaagacacttctaaccac
ttccacatcttcgttggtgacctttccaacgaagtcaatgacgaggtgcttctacaggcc
ttctccacctttggccccgtttccgaggctcgcgtcatgtgggacatgaagacgggcagg
tctcgtggctacggattcgtcgctttccgggatcgtgccgatgctgagcgtgccctcaac
tccatggacggcgagtggctcggttctcgagcaattcgctgcaactgggccaatcagaag
ggtcaaccttccatttcccagcagcaggccatggcctcaatgggcatgacgccaaccact
ccgtttggccaccaccatttccccactcacggagtccagagctatgacatggtcgtggct
caaactccgcagtggcagacgacttgctatgtcggaaatctgactccttacacctcgcag
gctgacctagtgccactcttccagaactttggttatgttaccgagacgcgcttccaatcg
gatcgtggatttgcctttatcaagatggacacgcatgagaacgctgccatggccatctgc
cagctcaacggctacaacgtcaatggccgccccctaaagtgcagctggggcaaagaccgt
cctccgactggccagtttgagggttactcgcctgcgggcggccctaactcagcttacccc
cagacgccgagcgcgtactttccgcagtatggtggtgggccacaaggtgggcccatgtca
ccctcaggacccagccccggcggagcacctttcgcgcagcagcagcagcaacaagccttt
ggtaaccctggcatgccgttccagcagcaaatgcagcagccgggcagcgctggtggctac
ggccgcggcgccccccagcagccacagtggggccagtctccccaagctgccttcagtcag
aacggctttgggggataccagggctaa
DBGET
integrated database retrieval system
