Bipolaris oryzae: COCMIDRAFT_23648
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Entry
COCMIDRAFT_23648 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K04043
molecular chaperone DnaK
Organism
bor
Bipolaris oryzae
Pathway
bor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
COCMIDRAFT_23648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bor03019
]
COCMIDRAFT_23648
03110 Chaperones and folding catalysts [BR:
bor03110
]
COCMIDRAFT_23648
03029 Mitochondrial biogenesis [BR:
bor03029
]
COCMIDRAFT_23648
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bor04147
]
COCMIDRAFT_23648
Messenger RNA biogenesis [BR:
bor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
COCMIDRAFT_23648
Chaperones and folding catalysts [BR:
bor03110
]
Heat shock proteins
HSP70 / DNAK
COCMIDRAFT_23648
Mitochondrial biogenesis [BR:
bor03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
COCMIDRAFT_23648
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
COCMIDRAFT_23648
Exosome [BR:
bor04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
COCMIDRAFT_23648
Exosomal proteins of breast cancer cells
COCMIDRAFT_23648
Exosomal proteins of colorectal cancer cells
COCMIDRAFT_23648
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Alp7A_like_C
FtsA
Motif
Other DBs
NCBI-GeneID:
19120475
NCBI-ProteinID:
XP_007684824
JGI:
Cocmi1_23648
UniProt:
W6ZYE5
LinkDB
All DBs
Position
Unknown
AA seq
671 aa
AA seq
DB search
MLSSRLSRNFLPRAASAARRTPAFRAPAMFARGYAEGGDEKVKGSVIGIDLGTTNSAVAV
MEGKVPRIIENSEGGRTTPSVVGFTKEGERLVGIAAKRQAVVNPENTLFATKRLIGRKFT
DAEVQRDIKQVPYKIVQHTNGDAWLEAQGQKYSPSQVGGFVLGKMKETAEAYMGKNVKNA
VVTVPAYFNDSQRQATKDAGQIAGLNVLRVVNEPTAAALAYGLDKATDNVVAVYDLGGGT
FDISILEIQSGVFEVKSTNGDTHLGGEDFDITLVRHLVDQFKKEQGIDLNNDRMAIQRIR
EAAEKAKIELSSSSQTDINLPFITADASGPKHINTKLTRAQLEKMMDPLISRTVEPVRKA
LKDANLKPTDISEVILVGGMTRMPKVTESVKSIFGRDPAKSVNPDEAVAIGAAIQGAVLA
GEVTDLLLLDVTPLSLGIETLGGVFTRLINRNTTIPTKKSQVFSTAADFQSAVEIKVYQG
ERELVRDNKLLGNFQLVGIPPAHRGVPQIEVTFDIDADSIVHVHAKDKSTNKDQSITIAS
GSGLSESEIESMVRDSEQYAEQDKERKNAIEAANRADSVVNDTEKALKEFEDRLDKTEAE
KIKEKIASMREFISQSQSGEGTATAAEIKEKTDELQNASLSLFDQMHKARSESQNQSEQS
QQPEGEGEKKQ
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcctcaaggttatcacggaattttttgcctcgtgcggcttcggcggcgagacgc
actcccgcattcagggctccggccatgtttgcgcgaggatatgctgagggcggcgacgag
aaggtaaagggctctgtcattggtattgatctgggtaccaccaactctgctgtcgctgtc
atggagggcaaagttccccgcatcatcgagaactctgagggtggtcgtacaacaccatca
gtcgttggtttcacaaaagagggcgagcgtcttgtcggtattgccgccaagcgccaggct
gtcgtcaacccagagaacactctctttgccaccaagcgtctcatcggtcgcaagttcaca
gacgctgaggtccagcgtgacatcaagcaagtcccatacaagatcgtccagcacaccaac
ggtgatgcctggctcgaggctcaaggacagaagtactcgccttcccaggttggtggtttc
gtccttggaaagatgaaggagactgccgaagcatacatgggcaagaacgtcaagaacgct
gtcgtcactgtccccgcctacttcaacgactcccagcgtcaagccaccaaggatgctggt
cagatcgccggtctcaatgttctccgtgtcgtcaacgaacccactgctgctgctctcgcc
tatggtctcgacaaggccaccgacaacgtcgtagctgtctacgatcttggtggtggaact
ttcgatatctccatccttgagattcagtccggtgtctttgaggtcaagtccaccaacggt
gatactcatctcggtggtgaggacttcgatattacccttgtccgccacctcgtcgaccag
ttcaagaaggagcagggcattgacctgaacaacgaccgcatggccattcagcgtatccgt
gaggctgctgagaaggccaagattgaactgtcttcttcatcgcagactgacatcaacctg
cctttcatcactgccgacgcttccggtcccaagcacatcaacaccaagctgacccgcgct
cagcttgagaagatgatggatcctcttattagccgcactgttgagcctgtccgcaaggct
ctcaaggacgccaacctgaagcccactgacatctccgaggtcatccttgttggtggcatg
acccgtatgcccaaggtcactgagtccgtcaagagcattttcggccgcgatcccgccaag
tccgtcaaccctgatgaggccgttgctattggtgctgctatccagggtgctgtccttgct
ggcgaggtcactgaccttcttctgctcgacgttactcctctctcgctcggtatcgagacc
cttggtggagttttcacccgtttgatcaaccgtaacaccaccatccccacgaagaagtcc
caggttttctccactgcagccgacttccagagcgctgtcgagatcaaggtttaccagggt
gagcgtgagctcgtccgcgacaacaagctcctcggaaacttccagcttgttggcattcct
ccggcccaccgcggtgtgcctcaaatcgaggttaccttcgacatcgatgctgactccatt
gtccacgttcacgctaaggacaagtctaccaacaaggaccagtctatcaccattgcttct
ggttccggtctttccgagtccgagattgagagcatggtcagggactctgagcagtatgcc
gagcaggacaaggagcgcaagaacgccattgaggccgccaaccgcgctgacagcgtcgtt
aacgataccgagaaggccctcaaagagttcgaggaccgtctcgacaagactgaggctgag
aagatcaaggagaagattgcctccatgcgcgagttcatttcccagagccaatctggcgag
ggtactgccactgccgctgagatcaaggaaaagaccgacgagctccagaacgcttctctt
agcctgttcgaccagatgcacaaggcccgctctgagagccaaaaccagagcgagcagtct
caacagcctgagggtgaaggcgagaagaagcagtaa
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integrated database retrieval system
