Bipolaris oryzae: COCMIDRAFT_23822
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Entry
COCMIDRAFT_23822 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
bor
Bipolaris oryzae
Pathway
bor03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
COCMIDRAFT_23822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bor03009
]
COCMIDRAFT_23822
Ribosome biogenesis [BR:
bor03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
COCMIDRAFT_23822
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nrap_D4
Nrap_D5
Nrap
Nrap_D2
Nrap_D3
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
19120499
NCBI-ProteinID:
XP_007685019
JGI:
Cocmi1_23822
UniProt:
W6Z9N6
LinkDB
All DBs
Position
Unknown
AA seq
1207 aa
AA seq
DB search
MAPPAIKRRKLEHSDSEAESEGSFADFDETNSGANSNGSDAEDGHDESDDMSMDGAQEME
DGDNDDDENENMSKDEEESSEAEENVQESQKQTTTAKATSAPKPPKRPAPSLQDGVYTVE
SFKSNIFKLQVDELLEQVKLKYGKKEASAENAMRTLKTIIEQIPSRDPLPIVEAEKVLKS
AGVVTPFPSPRPPKDALYKLQYERPASVNATGSYPLKTATRVEERFAIDLVVTMPKSLFQ
DKDYLNHRYFYKRAYYLACLAAGIKASKEHKFDLFFDSLNGNQLQPVLVVRPSGNGDADD
FSSSKCQINVLVALPEHTFAQNKLLPTSNCVRPKGSEDENSSKTLTATPFYNSSLQSDAN
ITAYLKLLHGTASKAEAFKDACILGRIWLKQRGFGSQIRKGGFGKFEWAAIMAILLQPNA
GTGAQSVSSSFSSYQLFKSTLQFLSRGDLTKKPFIFQASNITIPKAETAPVVFDGPRGQN
VLFKMTPWSYKRLQLEAKATVDMLSDSVSDQFDAAFILKTELLKYRYDATLEIPLASLGL
EAGSEEYDLQLRETCRKIHSTLTHALTDRITAISFTMPEEESWSISSRRPQERQSKSILI
NFETDPANATRTVDHGPPAENKQEAAVFRKFWGEKAELRRFKDGSILESVVWTVKDTSAS
VMEQLVLYILGRHHGSQVSEQARFTIDAFGHLVSAGRMQGQSGTAPFLPIMNAFSAMEKD
IRDLEELPLQLRHLRAADPQLRYASVDVPTVGHAPASIVLQFEGSGRWPDDLCAIQRTKI
AFLLRMAELLHKLESGYVARIGMENPSQPAQNQAFLDVTVATGFTFRIRIYHDREPTLFE
RQIKDKSLDTQSRESAAASLALYKREFIQSPQHSQALQTLCTRFLALSPAIRLTKKWFAS
HLLAPHFSPELIELLVIRTFLQPQPWPVPSTATTGFLRTLSWISRWDWRHVPLIVDFSTS
FSANPANLEDTSLKGMRLEDLDRLRTRFEAWRRIDPAMNRVVLFAATNLDEEGTTWTDKA
EPEKVVASRLTALAKAATQAVRADEDGFLKHISNNKDASKAYDTLSPEFLFVPSISEFDI
IISISSKHSLKSSKSRKPTTQFKNLDLQKSSSPLPAPTPLPQLFAEELSEVYGDAVLWFW
DPESLDKIVGLWNPVVTGQRSWKIKVGWNSVPVGKKDKVEIRVNKEAIVHEVRRLGGELV
KSVDAKF
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgcccgcaattaaacgaagaaagctcgagcatagcgactcggaagcagagagc
gaaggtagctttgccgactttgacgaaaccaacagcggtgcgaattcgaatggaagcgac
gctgaagatgggcacgatgagagcgacgacatgtccatggacggcgcgcaagagatggag
gatggcgacaatgacgacgatgaaaatgaaaacatgagcaaagacgaggaagaaagctcc
gaagctgaagagaatgttcaggaaagccagaagcagaccacaaccgccaaagccacgagc
gcaccaaagccgcccaagcggccagcacccagtcttcaggacggcgtctacactgtggag
tccttcaagtcgaacattttcaagcttcaggtagacgagctgcttgaacaggtcaaactc
aagtacggcaagaaggaggcatctgctgagaatgcaatgcgaaccctcaagactataatc
gagcagattcctagccgtgacccacttccaattgtcgaggccgaaaaggtgctcaaatcg
gctggcgttgtgactcccttcccaagccctcgcccaccgaaagatgctttgtacaaactg
caatacgaacggcctgcaagcgtaaacgcaaccggtagctaccccctcaaaaccgcgact
cgagtcgaagagagatttgcgattgatcttgtcgtgaccatgccgaagagtctgttccaa
gacaaggactatctgaaccaccgatacttctataagcgcgcatactatctggcctgcttg
gcggcaggaatcaaggcctcaaaagagcacaaatttgatttgttctttgatagcttgaat
gggaaccagcttcagcctgttcttgtcgtgcgaccgagcggcaatggcgatgcggacgat
ttttctagctcaaaatgccagatcaacgtgcttgtggcgctcccagaacacacttttgcc
cagaacaagcttctcccgacctccaattgcgtgcggcctaaaggtagcgaagacgaaaat
tcaagcaaaactctcacagcgacacctttctacaacagcagcctgcaatctgatgcaaac
atcacagcataccttaagctcttgcacggcacagcctcgaaggctgaggctttcaaggat
gcatgcattttggggcgcatttggttgaagcaacgcggatttggcagtcagattcgcaaa
ggagggttcggaaaattcgagtgggctgccattatggctattctgcttcagccaaatgct
ggaacaggtgctcaatcagtctcttcaagtttcagcagctaccaactattcaagtcgacg
ctgcagtttctgtcgcgtggggatctgacgaagaagccattcatcttccaagcatccaac
atcactatccccaaggcagagaccgctcccgtcgtctttgacggaccgcgaggacagaat
gtgttattcaagatgacaccctggtcgtacaagcgtctgcaattagaagcaaaggctact
gttgacatgttgagcgattctgtatctgatcagtttgatgcagccttcattctgaagact
gaactgctcaagtaccgttacgatgcaacactcgagattccccttgcctcgctcggtctc
gaagctggaagtgaagaatacgatttgcagcttcgcgaaacatgtcgaaaaatacatagc
accctgacccatgcgctgaccgaccgtatcaccgccatatcgttcactatgcccgaggag
gaaagctggtcgatatcttcaaggcgccctcaggaaaggcagagcaagagcatcctcatc
aacttcgaaacagatcctgccaacgccactcgtactgtggatcatggacctccagcagaa
aacaaacaagaggctgctgtcttccgcaagttctggggcgaaaaggctgagctcaggcgc
ttcaaagacggaagtattctggagagtgttgtttggacggtcaaggatacatcagcatct
gtcatggagcaacttgttctctacatacttggcagacaccatggttcacaggtatctgag
caagccaggttcacaattgatgcattcggccaccttgtatcggcaggccgtatgcaggga
cagtctgggaccgcgccctttcttcccattatgaacgcgtttagtgccatggaaaaggac
attcgggacttggaagagctaccgcttcaacttcgccatctgagagctgccgatccgcaa
ctacggtatgcatctgttgacgttcccactgtgggccacgctccagcatcaatcgtattg
caatttgaaggttctggacgctggccggatgacttgtgcgccattcagcggactaagatt
gctttcctcctccgaatggctgagcttctacataaattggagtctggctatgttgcgcgt
attggtatggaaaatccctcacagccggctcaaaaccaggcattcttggatgtaacagtt
gctacgggcttcacattccgcattcgtatctaccatgatcgtgagcctacgctattcgaa
cgccaaatcaaggacaaatcattggacactcaatcgcgagagtctgctgctgcttctctg
gcactgtacaagcgcgagttcatccaatcacctcaacattcgcaagcactacaaacgctt
tgcaccagattcttggcactttcgccagcgatacgattgacaaagaagtggttcgcgtcg
catctgctcgcaccgcacttttcgcccgagctcattgaacttcttgttatacggacgttc
ctacagccacaaccatggcctgtgccatcaacagcaacaacgggtttcttacggacctta
tcgtggattagtcgatgggactggcgtcatgtccccttaattgtagatttttcaacatct
ttctccgccaatcccgccaatcttgaagacacatctctgaagggcatgaggttagaagat
ctcgaccgcttacgaacacgcttcgaggcatggcgacgtatcgatcctgccatgaatcgc
gtcgtacttttcgcagccacaaacctcgacgaagaaggcaccacttggacagataaagca
gagccagaaaaggtagttgcttcacgtttgacggctctggccaaagcagccacacaggct
gttcgcgcagacgaagatggcttcttaaagcatatcagcaacaacaaggatgcgtccaaa
gcgtacgatactctaagcccagagttcctcttcgtccccagcatatcagaattcgacatc
atcatttccatctcctcaaaacacagcctcaaatcatccaaatcccgcaaacccaccacc
caattcaagaaccttgacctccaaaagtcatcaagtcccttacccgcaccaactccccta
ccccagctattcgccgaagaactctcagaagtctacggcgacgcggtgctgtggttctgg
gatccggagagtctagataagattgtgggactctggaatccggttgttaccggtcagagg
agttggaagattaaagttgggtggaatagtgtgccggtagggaagaaggataaggttgag
attagggtgaataaagaggcgattgtgcatgaggttaggaggttgggtggggagcttgtg
aagagtgttgacgcgaagttttga
DBGET
integrated database retrieval system