Bipolaris oryzae: COCMIDRAFT_23970
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Entry
COCMIDRAFT_23970 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
bor
Bipolaris oryzae
Pathway
bor04130
SNARE interactions in vesicular transport
bor04138
Autophagy - yeast
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
COCMIDRAFT_23970
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
COCMIDRAFT_23970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bor04131
]
COCMIDRAFT_23970
Membrane trafficking [BR:
bor04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
COCMIDRAFT_23970
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
Fusion_gly
DUF4332
DUF7605
DUF1542
Synaptobrevin
YqjK
Motif
Other DBs
NCBI-GeneID:
19120524
NCBI-ProteinID:
XP_007685215
JGI:
Cocmi1_23970
UniProt:
W6ZL66
LinkDB
All DBs
Position
Unknown
AA seq
226 aa
AA seq
DB search
MSNLIDADAGTERFSGYEAELKLVQADLSQQIDQIKETTGEPRKAAISRAERALEEAEEL
IGQMRLEKSNIPANLKSKYNARFRNFEHDLDTSKRKLQTYTSDRSRLFGDRYTDNPDGGD
AQLEQRQQLLSGTDRLNRSSNRLRESQRIALETEQIGASTLGDLHRQREQITNTRERLLE
SEGYTDRSIKTLRGMARRMATNRIITIAIITVLVLLIIAVIYSKFR
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacctcatcgatgccgacgcgggcaccgagcgcttcagcggctatgaagccgaa
ctcaagctggtacaagccgacctcagccagcagatagaccagatcaaagaaacgacgggc
gagcccagaaaggccgccatcagtagggcagagcgtgcgctcgaggaggccgaggagctg
attggccagatgcgcctcgaaaagtccaacattcccgccaacctgaagtccaagtataac
gcgcgctttcgcaattttgagcacgacctcgataccagcaagcgcaagctgcaaacgtac
acctcggaccgctctaggctctttggcgaccgctacaccgacaaccctgatggcggcgac
gcccaactcgagcagcgccagcaactcctttctggcacagatcgcttgaacaggtcgagc
aacaggctgagggagagccagcgcattgcgctcgagacggagcagattggcgccagtacc
ctcggcgacttgcacagacagagggagcaaatcacgaacacaagggagaggctgctcgag
agcgagggatataccgatcggagtatcaaaactctgaggggcatggcgagacggatggcc
acgaaccgcatcattaccattgccattataaccgtcctggtgctgctcatcatcgccgtc
atttacagcaagttcagatga
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integrated database retrieval system
