Bipolaris oryzae: COCMIDRAFT_25240
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Entry
COCMIDRAFT_25240 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K11883
RNA-binding protein NOB1
Organism
bor
Bipolaris oryzae
Pathway
bor03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
COCMIDRAFT_25240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bor03009
]
COCMIDRAFT_25240
03051 Proteasome [BR:
bor03051
]
COCMIDRAFT_25240
Ribosome biogenesis [BR:
bor03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
COCMIDRAFT_25240
Proteasome [BR:
bor03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
COCMIDRAFT_25240
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
DZR_2
Zn_ribbon_NUD
DUF2321
Motif
Other DBs
NCBI-GeneID:
19120728
NCBI-ProteinID:
XP_007686692
JGI:
Cocmi1_25240
UniProt:
W6Z4U4
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MEPEPSTQQKPIHSLVLDTGPLIKNIVSISTLINSAEELYTTPDILREVRDEATRSRVQT
TLVPFLKIRTPSPASYDAVVEFSKKTGDHAVLSKQDLGILALAYEVHCEKNGGTWGLREV
PKGEVKRRPEDIEREKAEKAERERLAKEAAEAGVLSKSAAKRRRRAEKARNAVAEGTEEV
AAEEQEVPESGEVEDEEGWEQPTGKRAAKARAPKSTKFNFKPAEEKVESEAVQEQEKDEK
VLVDDDQEDGGVAITQEEVKEQIQEQVAAQVQDQVHEQVHEQVQEQIHEQLAEKGEERLE
SQAVEKVEEKVEEQVQEQVQEQLQEQLGEQGLIEKSATVEVPSANIHVEQNAELSVAPEN
PEQQDPTEALSQEPSLEHDMSSLSINQQPTPPTTDDSAADSDSDGDWITPTNLSKHQAAD
SDLQSHLQTASKPAQLDLATMTTDHAMQNVLLQLNLTLLSPSLQRIKTVTSKIHRCHACF
LLTKEMTRQFCPRCGQPTLQRVSCSTNAQGEFRIHLSKSYTYNKRGDRYSIPKPIAGTAN
TKWKEGSGGGKGGWGRELILAEDQKEFLKVKGEEKRRKGRDALDEDFLPGILTGERGVKG
GKVRVGAGRNVNAKKRS
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggaacccgagccttccacccagcaaaaacccattcactcacttgttctcgacactggc
cctctgatcaaaaacatcgtgtctatctccaccctcatcaactctgccgaggaactctac
acaaccccagacatcctgcgtgaagtccgggacgaagcaacccgatcacgtgtgcaaact
actctcgttccctttttgaaaatcagaacgcccagcccagccagctacgatgccgttgtt
gaattcagcaagaagactggagatcatgctgtgctaagcaaacaggatctgggtattttg
gcgctagcgtatgaggtgcactgtgagaagaatggagggacttgggggcttagagaagta
ccgaagggtgaggtgaagaggaggcctgaggatattgagagggagaaggccgagaaggct
gagagggagaggttggccaaggaggcagcagaggctggtgtgctgtcgaaatctgcggct
aagcgaaggcgtagggcggagaaggcaaggaatgcggttgcagagggtacggaagaggtg
gcggcagaagagcaagaggttccggagagtggcgaggtcgaggatgaggagggctgggag
cagccgactggaaagcgtgcggctaaggctagggcacccaagtcgacaaagtttaacttc
aagcctgctgaagagaaggttgagagtgaggctgttcaggaacaagagaaggatgaaaag
gttctggtcgacgatgatcaagaggatggaggggttgccatcacccaggaggaggtaaag
gagcagattcaagagcaggttgcagcgcaagtccaggatcaggttcatgagcaggtccat
gagcaggttcaagaacagattcacgagcagcttgcggaaaagggcgaagagaggcttgag
agccaggctgtggaaaaggttgaggagaaagtggaagagcaggtccaggagcaagttcaa
gagcagctccaagaacaactcggtgaacagggactcattgagaagtcggcaacagtcgaa
gtaccaagcgcaaatattcatgttgagcaaaatgcagagctgtccgtcgcaccggagaac
ccagaacaacaagaccctaccgaagccctttcgcaggagccttctctcgagcacgatatg
tcctcactgtccataaaccaacaacccaccccacccacaaccgacgattcagccgccgac
tcagactcagacggcgactggatcacccccacgaacctttccaagcaccaagccgccgac
tcagacctacaatcccacctccaaaccgcctccaaacccgcccaactcgacctcgcaacc
atgaccaccgaccacgccatgcaaaacgtgctccttcaactcaacctcaccctcctctcc
ccctccctccaacgcatcaaaaccgtaacttcgaaaatccaccgctgccacgcctgcttc
ctcctcaccaaagaaatgacgcgacaattctgtccccgctgcggccaacccaccctccaa
cgcgtctcctgcagcaccaacgctcaaggcgaattccgcatccacctctccaaatcttac
acgtacaacaagcgcggagatcgctacagcatccccaagcccattgccggtacggcaaac
accaagtggaaggagggctcgggcggtggtaaaggggggtggggacgagaattgattctt
gcggaagaccaaaaggagtttttgaaggtcaagggggaggagaagaggaggaaggggagg
gatgcgcttgatgaggattttctgcctgggatactgacgggggagaggggggtgaagggg
ggaaaggttagggttggggcggggaggaatgttaatgctaagaagaggtcgtga
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