KEGG   Bipolaris oryzae: COCMIDRAFT_25430
Entry
COCMIDRAFT_25430  CDS       T03125                                 
Name
(RefSeq) hypothetical protein
  KO
K10756  replication factor C subunit 3/5
Organism
bor  Bipolaris oryzae
Pathway
bor03030  DNA replication
bor03410  Base excision repair
bor03420  Nucleotide excision repair
bor03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bor00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    COCMIDRAFT_25430
   03410 Base excision repair
    COCMIDRAFT_25430
   03420 Nucleotide excision repair
    COCMIDRAFT_25430
   03430 Mismatch repair
    COCMIDRAFT_25430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bor03032]
    COCMIDRAFT_25430
   03036 Chromosome and associated proteins [BR:bor03036]
    COCMIDRAFT_25430
   03400 DNA repair and recombination proteins [BR:bor03400]
    COCMIDRAFT_25430
DNA replication proteins [BR:bor03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    COCMIDRAFT_25430
  DNA Replication Termination Factors
   ELG1-RFC complex
    COCMIDRAFT_25430
Chromosome and associated proteins [BR:bor03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    COCMIDRAFT_25430
DNA repair and recombination proteins [BR:bor03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     COCMIDRAFT_25430
  Check point factors
   HRAD17(Rad24)-RFC complex
    COCMIDRAFT_25430
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 AAA_22 AAA AAA_16 AAA_24 Rad17 Rep_fac_C ATPase_2 ABC_tran T4SS-DNA_transf
Other DBs
NCBI-GeneID: 19120760
NCBI-ProteinID: XP_007686886
JGI: Cocmi1_25430
UniProt: W6ZGH0
LinkDB
Position
Unknown
AA seq 355 aa
MALLVDKHRPRNLEALSYHPELSDRLRALAQSGDFPHLLVYGPSGAGKKTRIVATLKELY
GPGVEKIKIDARVFQTTTNRKLEFNIVASVYHLEITPSDVGNYDRVVVQDLLKEVAQTQQ
VDLGAKQRFKVVVINEADHLSRDAQAALRRTMEKYSPNLRLILLANSTSNIIAPIRSRTL
LVRVAAPTEAEICDVLSKVGKKEGWKDVESLHQRIAKDSGRNLRKALLMFEAVHAQNEKI
TDQTHIPPPDWEALIEQIARQIVEERSPQRLLQVRASLYDLLSHCIDPTTIIKTLTWKLI
PKTDDALKPEVIKWAAFYEHRCKMGAKHIFHLEAFVAKYMRLYESYSMGLDFDSA
NT seq 1068 nt   +upstreamnt  +downstreamnt
atggcacttttagtagacaagcatcggccgcgtaaccttgaagcgctcagctatcatcct
gagctttcagatcgcctacgagctctggcacaaagcggtgacttcccccatctcctcgta
tacggcccttctggagcaggcaagaagacgcgtatcgtcgcaaccctcaaagaactctat
ggccccggtgtcgaaaagatcaaaattgatgcgcgtgtcttccagaccacgaccaaccgc
aagctcgaatttaacattgtcgcctcagtatatcacctcgagattacgccttcagatgtt
ggaaactatgacagagtagtggtacaggacttgctcaaggaggtcgcacagacgcagcaa
gtcgatttgggcgcaaagcagcgcttcaaggttgtcgttatcaacgaagccgaccatctg
agtagagatgcccaggcagcattgaggcggaccatggagaaatacagtcccaacttgcga
ttgatcctgttggcaaattcgacgagtaacatcattgcccctatcagaagtagaacgctg
cttgtcagagttgcggcgcctaccgaggctgagatctgcgatgtgttgagcaaagtggga
aagaaggagggatggaaggatgttgaaagcttacaccagagaatagcgaaagacagcggg
cgcaacctgcgaaaggctctcttgatgttcgaagcagtgcatgcacaaaacgagaagatt
acagatcagacgcacattccccctcccgattgggaagcgctcatcgagcagatcgcccgc
caaattgtcgaagagcgctctccccaacggctccttcaggttcgcgcttccctctacgat
cttctatcacactgcatcgacccgacgactatcatcaaaacgctcacgtggaaactcata
ccaaaaacggacgacgcgctgaagccagaagtcatcaaatgggcggccttctatgagcat
aggtgtaagatgggcgctaagcatatattccatctcgaggcgtttgttgcaaagtatatg
aggctgtacgaaagctattccatgggcttggacttcgattccgcataa

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