Bipolaris oryzae: COCMIDRAFT_2639
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Entry
COCMIDRAFT_2639 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K12182
hepatocyte growth factor-regulated tyrosine kinase substrate
Organism
bor
Bipolaris oryzae
Pathway
bor03250
Viral life cycle - HIV-1
bor04144
Endocytosis
bor04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
COCMIDRAFT_2639
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
COCMIDRAFT_2639
04145 Phagosome
COCMIDRAFT_2639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bor04131
]
COCMIDRAFT_2639
Membrane trafficking [BR:
bor04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
COCMIDRAFT_2639
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
FYVE
Vps27_GAT-like
GAT
UIM
FYVE_CARP1-2
FYVE_2
ENTH
IBR
Motif
Other DBs
NCBI-GeneID:
19120923
NCBI-ProteinID:
XP_007684909
JGI:
Cocmi1_2639
UniProt:
W6ZEX9
LinkDB
All DBs
Position
Unknown
AA seq
754 aa
AA seq
DB search
MAGWFGSSANGALDEQIERATSSSLEDMPLNLEISDVIRSKTVQPKDAMRSLKKRIGHKN
PNVQLAALNLTDTCVKNGGAHFIQEIASREFLDNMTSLLKAPPSVAPNHDVKNKMLQLIQ
SWAIAAEGRTNLGYIKEVYQSLQREGYHFPPKENITGSMLDSSAPPEWTDSDVCMRCRTA
FTFTNRKHHCRNCGNVFCGACSSKNIPLPHLGIMDPVRVDDGCHAKLTEKSRGGHLPRVF
DAHRPQKTLYQGSMEPRNARIEDSFDADLKRALEMSLDEAKGNSSSGFVSQSQLSQSKST
HATSKKQPEEEEDADLAAAIAASLADMEEQKRKYSTTFREQASNADSSTPFVAPKNDYEL
TPVEAENINLFSTLVDRLQHQPPGTILREPQIQELYESIGKLRPKLARTYGETMSKHDTL
LDLHAKLSTVVRYYDRMLEERLSSTYNQANTMYGLPPSAQRPASNLYPSIQSGAPDAAGE
NYYTGTAPPSGAYGQPQSQYGGGYQPQQQTYSQFDKRPASYAPPNEQYQQPSQPYPNLAQ
RPASTSYQQPSSPQLQRQISNQQYPSQAPPSGVSDADSASYYYGESNTAQPSQPPMQRTQ
SYGSQPSQQPPSPQAYARAPPQQTPISPPSQPATAWQNPPYPQQDQPPNWQQNQNQNQVP
PQQGPPQQAPQQQAPAQQQPQAPQQQQQQPPQPQPQYWQQQQHQVPHQQQPQTSGWQPAP
YATGGYGPESFPSAPQNQLPAQQAKVADEPLIDL
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggcgggctggttcgggtcctccgccaacggcgcgctcgacgagcagattgagcgcgca
acctcttcaagcttagaggatatgccactcaatctcgagatatccgacgtgattcgatcc
aagacagtgcagcctaaagacgccatgcgctcactgaagaagaggataggacacaagaac
cccaacgtccagctcgcagctttgaatctcacagacacctgcgtcaagaacggcggcgct
cacttcatccaagagatagcttctcgcgagttcctcgacaacatgacttccctgcttaag
gcacccccctccgtcgcacccaaccacgacgtcaagaacaagatgctccagttgatacag
tcatgggcaatagctgcagaagggcgcacaaacctgggctacatcaaagaagtgtaccag
agcctacagcgcgaaggctaccactttcctccaaaagagaacattactggaagcatgctc
gatagcagcgcgcctccagagtggaccgactcggacgtatgtatgcgatgccgcaccgcc
ttcaccttcaccaaccgaaagcaccactgccgaaactgcggaaacgtcttctgtggcgcc
tgctcaagcaagaacatccccctaccgcacctcggcatcatggaccctgtgcgcgtcgat
gacggctgtcacgccaagctcactgagaaatcccgagggggacaccttcccagagtgttc
gatgcccatcggccccagaaaacattataccagggctcaatggaaccccgaaacgcccgc
atagaagacagtttcgatgcagatctgaagcgagccctggagatgagcctggatgaggcc
aagggaaacagctcttctggctttgtgtcccaatcgcaactgtcacaatccaagtctaca
cacgcaacttccaagaagcagcccgaggaagaggaggacgccgacctggctgctgctatc
gcggcctctttggctgacatggaagaacagaagaggaagtactctacaaccttccgagag
caggcttccaacgccgattcatcaacccctttcgtcgcacccaagaacgactacgaattg
acgcctgttgaagctgagaacatcaacttgttttccactctagtcgaccgcctacagcat
cagccccctggcacaatcctccgtgagccgcagatacaggagctatacgaaagcattggc
aaactgaggccgaagcttgcgcgtacctatggtgagactatgagcaagcatgatacacta
ctggatctgcatgccaagctctctactgttgttcgttactatgatcgcatgcttgaggaa
agactgtcgagcacatacaaccaagccaacaccatgtatgggctgcctccgtctgctcaa
cggccggcgtcaaatctttatcctagtatacagtcaggcgccccagatgctgctggtgaa
aactactacactggaactgcgcccccttccggcgcgtatggacagcctcagtcacagtat
ggtgggggttaccagccacaacaacagacctattctcagttcgacaaacggcccgcatcc
tacgccccacctaatgaacagtatcaacaaccatcacaaccatacccgaacttggcccag
cgcccagcaagcacatcctaccaacaaccttcatcaccacagctacaacgtcaaatttcg
aaccagcaatatccttctcaagcaccaccgtcaggagtatcagatgcagatagtgccagt
tactactatggagaaagcaatacggctcaaccttcacagccacccatgcaacggacacaa
agttatggctctcaaccttcacaacaacctccttctccccaagcatacgctcgggcacca
ccacagcagacacctatttcaccgccctcgcagcccgctactgcctggcaaaacccacca
tatcctcaacaggaccagcctccaaattggcaacagaatcagaaccagaaccaagtccca
ccccagcaaggtccaccccagcaggctcctcaacagcaagcccctgctcaacagcaaccc
caagctcctcagcaacagcaacagcagccaccgcaaccgcaaccgcagtattggcaacag
caacaacatcaagtgccgcaccagcagcagccgcaaacgtctggatggcaaccagccccg
tatgcgactggaggttatgggccggagagtttcccgtctgcgcctcagaaccaactcccc
gcacagcaggcaaaggtggctgatgagcctctgattgatttgtaa
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integrated database retrieval system