Bipolaris oryzae: COCMIDRAFT_26773
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Entry
COCMIDRAFT_26773 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
bor
Bipolaris oryzae
Pathway
bor03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
COCMIDRAFT_26773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bor03021
]
COCMIDRAFT_26773
Transcription machinery [BR:
bor03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
COCMIDRAFT_26773
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
19120995
NCBI-ProteinID:
XP_007688478
JGI:
Cocmi1_26773
UniProt:
W6ZC45
LinkDB
All DBs
Position
Unknown
AA seq
713 aa
AA seq
DB search
MNGAMNGSQPPTAAPIAPVASNGQQPSQQPQPPQQQMPVRRRRPRPQADVLRKPRRPLQN
ITKPMVSLSQMNEARKPPPGPAADGTHSKDALRQEYLDQGATVFPLIVSRKDLKELRHHV
MRLQSKSHVDITDEKQFTPPIKLHRRDPRAPPSGIGSHYEEEDTKEDLEEIKERERIEQQ
KEERRKVREENQAKIAPTGMKKPPAFHKKTEQKYRPDDTPEAKKRQLLRYEETLPWHLED
YENKQTWVGTYESELSETHVMLSATRPGDPNTAIQMAPMERWYRFNVKGKIKPTSEDVDK
ILAKVESGGPRFFAELERRQAQRMKAEDEARMFSGVRTRVGGGADDEGRIKRERFDDDTI
GFVKREADADDIDFNLEEDFADDEEGLNGLFEGEEQDVKEAAEKLKRDQLQAALWDRPDE
QLIAQKEEEERRAAEETRAMEKITRKTLAKREKQYDYLDSDPENPYLTESESDTDSETER
QQAKEEAEKKAAEQNGKAPEAGNVPSGASTKGSNTPSGNHKPGESKSKKRPGSPNLSEAS
GNESSRKKHKKKHHEKLADGSRKSTLGNLKGAGSGSDSEMTDAGKKRKKEKKEKNRIMLG
GSPAGTPGASRAGSPAANGSRAGSPSAGPSKPSLPSAKEIYESLPPQGMNIQNLILKFKG
RVDKSNTQVFIKLVKAVSRFDKAKSWLTPLEKLPSDEHINAFMNASNAPKPTQ
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcgcaatgaatggaagccagccgcctactgcagcgcccatcgcgcccgtcgcc
tcgaatggccaacagccgtcgcagcaaccgcagccaccgcagcagcagatgcctgttcgt
cgccgtcgcccgcgtccccaggctgatgtcctgcgaaagccccggcgtccgctacagaat
atcaccaagcccatggtgtctttatcgcagatgaatgaggctaggaagcccccgccaggc
ccagccgctgatggcacgcattccaaagacgcgctgcggcaggagtatctcgatcaaggc
gccaccgtctttccactcatcgtgagccgcaaggacctgaaagagctgcgacaccacgtc
atgcgcctgcagagcaagagccatgttgatattaccgatgagaagcagttcactccgccc
atcaagctccaccgtcgagatccccgcgcgcctcctagtggtatcggatcacactacgaa
gaggaggatacaaaagaggatttggaagagataaaggaacgcgagcgcattgagcagcag
aaggaagagcgacgcaaagtacgcgaagagaatcaggctaagatcgcgcctaccggcatg
aagaaacctcctgccttccacaagaagacggagcagaagtaccgacccgacgatactcca
gaagcaaagaagcggcagctgctacgctacgaagaaacattgccctggcatttggaggac
tacgagaacaagcagacatgggtaggtacctacgaatcggagctgtcagagacacacgtc
atgctctcagccacacgtcctggtgacccaaatacggccatacaaatggcgcctatggag
cgctggtacagattcaatgtcaagggcaagatcaagccgactagcgaggacgtggacaaa
atcttggccaaggtcgagagtggtggacccagattttttgcagagcttgagagacgtcaa
gcgcagcgtatgaaggctgaagatgaggcacggatgttcagcggagtgcgcacgcgtgtg
ggcggtggtgctgatgacgagggccggatcaagcgggagcgttttgatgatgatacaatt
ggctttgtcaaacgggaagctgatgctgacgatattgacttcaaccttgaagaagacttc
gcagacgatgaagaaggactcaatggtctctttgagggtgaagagcaagacgtcaaggaa
gcagcagagaagctgaagcgtgatcagctgcaagcagccctttgggatcgtcccgacgag
cagctgatagcacaaaaggaagaagaggagcgtagggctgctgaggagacgagagccatg
gagaagatcacgcgcaagacgctagccaagcgtgagaaacaatatgactatctcgacagc
gacccggaaaacccataccttaccgagagcgagtcggacacagactctgagacggagcga
caacaggcaaaggaagaggcagagaagaaggcagctgagcaaaacggcaaagccccagaa
gctggcaatgttccgtctggtgcatccaccaagggctccaacaccccctcgggcaaccac
aagcctggggaatccaagagtaaaaagcggcctggttctcccaatctttcagaagcaagt
ggcaacgaatcgtcgcgtaagaagcataagaagaagcaccacgaaaagctggctgatgga
tctcggaaatccactcttggcaatctcaagggcgcaggctcgggtagtgatagcgagatg
accgatgcgggtaagaagcggaagaaggaaaagaaagaaaagaaccgcatcatgcttggt
ggatcgcccgccggtactcctggtgctagtcgcgcaggcagccccgccgcaaacggtagc
cgcgcaggtagcccctccgctggcccatccaaaccctctctgccttccgcaaaggagatt
tacgaatctctcccaccccaaggcatgaacatccagaatctcatcctcaaattcaagggc
cgtgtcgacaagagcaacacgcaagttttcatcaagctcgtcaaagcggtttcccgcttc
gataaggcgaagagctggctcacgcctcttgagaagctgccgtccgacgagcacatcaac
gcgtttatgaacgcgtcgaatgcgccgaagcctacgcagtga
DBGET
integrated database retrieval system