Bipolaris oryzae: COCMIDRAFT_27049
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Entry
COCMIDRAFT_27049 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
bor
Bipolaris oryzae
Pathway
bor00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
COCMIDRAFT_27049
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bor01007
]
COCMIDRAFT_27049
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bor03016
]
COCMIDRAFT_27049
03029 Mitochondrial biogenesis [BR:
bor03029
]
COCMIDRAFT_27049
Enzymes [BR:
bor01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
COCMIDRAFT_27049
Amino acid related enzymes [BR:
bor01007
]
Aminoacyl-tRNA synthetase
Class I (G)
COCMIDRAFT_27049
Transfer RNA biogenesis [BR:
bor03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
COCMIDRAFT_27049
Prokaryotic type
Other AARSs
COCMIDRAFT_27049
Mitochondrial biogenesis [BR:
bor03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
COCMIDRAFT_27049
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
Motif
Other DBs
NCBI-GeneID:
19121052
NCBI-ProteinID:
XP_007688785
JGI:
Cocmi1_27049
UniProt:
W6ZMA8
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MAGLSTLSLASLEQWLDRLAISEILTGTNEANLLSNPLDICRSSLAHAVSNLVTGDIQDA
FKSIQWPNNIFNGDLSVTIPRLWPGCKPDELSAELVDKFPKDHGLFDPPIPEGVHLRFFL
KLDAVPRFLLPYILDRKSTYGSFLPKEHVRQKLVVEFSSPNITSEFQGKHLRSTVIGAFI
GQLYESMGWNVTRINYLGDWGKPIALLYVGWVKYGSEEAYEADSVGHLLQVYHRIEEDFK
PEQAASKQARDEVAKEGEDKGEAQVEIESKGIFAERNEAFRKLEDGDEILVAFWERLRKV
NIDNYTEFYERLGIHFDEYTGESQICQDTMIEVEQMLKEKNISEESGGAWIVHMQKLGIK
SGTAIIRDRTGASTYLLRDLAAVLERSRKYSFDKMIYVVASDNSVHFGQLIKILKVLDLK
NLASKLQHVKFSETSRMAAALGKGYKPQGILDACEEAMELLSGSDANKLALIGELDKVKE
GLATSALLIQELSTRLVTAHAFDTSAMASFKLGSGPDLQYWLARLHLLLKNVDSIAEPSD
EDYEILAEEDQANLLRILAQYPEVVKATYSSLEPAGIVTYLTSVTEQLAECLAEDDGAEE
VDREDEDVTPGLAALYEATAIVLENGIRMLGLVPVATSSSPERADTLVVG
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggccggtctatcaacactcagtcttgccagtttagagcagtggctagatcgccttgcc
atctcagaaattcttactgggaccaatgaagccaatcttctctcaaaccctcttgatatc
tgccggtcgtccctggctcatgccgtttccaaccttgtgacgggtgacattcaagacgca
ttcaagtctatacagtggccgaataatatattcaatggcgacctgtctgtcaccatcccg
agattgtggccaggatgcaagccagatgagttgtcagcggagttggtggacaagttcccg
aaagaccatggtctgttcgaccctcctatacctgaaggggtacatctgagattcttcctc
aagctcgatgctgtaccacgctttctattgccgtacatcttggacagaaagagcacatat
ggcagctttttgccgaaggaacatgtgcgccagaaacttgtagttgagttctcatcgcca
aacattacaagcgagttccaggggaaacaccttcgcagcacagttattggcgcctttatt
ggccagctatacgaatcaatgggatggaatgttacgcgcatcaactacctcggcgattgg
ggtaagccaattgctttactctatgttggatgggtgaagtatggttcagaagaggcatat
gaagcagattccgttggtcacctcctccaggtctatcacaggattgaagaggacttcaag
ccagagcaagctgcaagcaagcaggcgcgtgatgaagtagccaaagaaggagaagataaa
ggggaggctcaagttgagattgaaagcaaaggcatctttgccgaacggaatgaagccttc
aggaagctcgaagatggcgacgaaattcttgtggcgttctgggaacgtctcaggaaggtc
aatattgacaactataccgagttttatgaacgactcggtattcactttgatgagtacact
ggggagtcccagatctgccaagacactatgatcgaggttgagcagatgttgaaagaaaag
aatatctcagaggaaagtggaggagcttggatcgttcacatgcagaaactaggaataaaa
tccggaactgccattatccgcgaccgcactggagctagcacgtatcttcttcgcgacctt
gctgccgtactggagaggtcgagaaagtactcgttcgataagatgatttacgttgtggcc
agtgacaacagcgtccacttcggtcagctcatcaagatcttgaaagtcttggacttgaag
aaccttgccagcaaactacagcatgtcaaattcagcgaaacttcgaggatggcagcagca
ctgggcaagggctacaagccccagggcatactggatgcatgcgaggaagcaatggagtta
ctgtctggatcagacgcaaacaaacttgctttgattggtgaactagataaagtcaaagag
ggtctagcaacatccgcacttctcatccaagagctttccacccgcctggtcaccgcgcat
gccttcgacaccagcgcaatggcctctttcaaacttggatcaggaccagatctccaatac
tggctagcacgacttcatctcctcctcaaaaacgtcgattctatagctgaaccttcggat
gaagactacgaaatactggcagaagaagaccaggcaaaccttttgcgtatcctggctcag
tatccggaagtcgtaaaggcaacgtatagctcacttgagccggccggcatcgtcacgtat
ctcactagcgtgactgagcagctggccgagtgccttgcggaagatgatggggctgaggaa
gtggacagggaggatgaagatgtcactccaggacttgctgcgctatacgaagccactgcg
attgttctagaaaatggcattagaatgctgggcctagttccggtagccacttcatcctcg
ccagagagagcggatacactagtggtgggttag
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