Bipolaris oryzae: COCMIDRAFT_27733
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Entry
COCMIDRAFT_27733 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K13103
tuftelin-interacting protein 11
Organism
bor
Bipolaris oryzae
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bor03041
]
COCMIDRAFT_27733
Spliceosome [BR:
bor03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
COCMIDRAFT_27733
Other components
Complex C specific factors
COCMIDRAFT_27733
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TFIP11_C
G-patch
G-patch_2
DUF2397
Motif
Other DBs
NCBI-GeneID:
19121177
NCBI-ProteinID:
XP_007689637
JGI:
Cocmi1_27733
UniProt:
W6ZJR3
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MDADGGKRKHSFRQQPNKRAKVEDGSALKTGFGAKMLAKMGYKGEGGLGKEGAGISEPIQ
VVNRGTKGGIGSVAEKSEQQKREERRKAEENGEKYVDTSEEEREERKKRKAKARGEARTA
TPRPKKTLYELEAAGMHVPPILQSIIDATTGASTPASGVSLRGPDIVPFENSLQARVRRD
LNSFSEAFEQLQIESQSIPPQEYALQKELEALERQMDELEDLHSRIQSLRTGTFGAVCEG
LKSLRAAYPSKPLHRESIAVILPHFSKATASWDPLEDALEDMAAAFAELADIIQPRSRRI
VSQAYTHPSEALVNQNTVEEEDTIKRGTTSAYESMMLKLWLPPVSSAVTQWDVKHARPLL
HLVEVWTPVLPPFVSKRVLEQVTRKLLTSIHEWNPRKFKKSPHTWVMEWLPFLRPADLDP
KGSGLVAEIKRKIRHALHSSDLSKGPLPGMDQWRRLFGKGEFDHLLTSHLLPRLAAHVRD
HFEIDPNEQQDVAPLKAVFSWKGLLSNEAIGEVLRAHFFPKFLAITHEWVSSKEVVFAEV
RAWLAWWRNDVQKELSNVPSVELGWKEAYTLAYQAEKLGEARLTDLPTPQMESTGPSVET
IRPAKPANKEPVPSAPPAREQTFKDTVERFCEEENLLLIPLREAHEQTALPLFRITASAT
GRGGAVVYLKDDDVWVQNKKDRSVWDPVELGEMLIAKAEGK
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgacggtggcaagcggaagcacagcttcagacagcagccgaacaagcgcgca
aaggtcgaagatggcagcgcgctcaaaacgggctttggcgcgaagatgctcgccaagatg
ggatacaagggcgaaggtggtctgggaaaggaaggagccggtatctcagagcccatccag
gtcgtcaatcgcggtaccaagggaggtatcggttcagtggcggagaagagtgaacaacag
aagcgcgaggagcggcgcaaggccgaggagaatggcgaaaagtatgtcgacacgtctgaa
gaagagcgcgaggaaaggaagaaaagaaaagcaaaggctagaggcgaggcacgcaccgca
actccccggcccaagaagactttgtacgagttggaggctgctggaatgcatgtgccgccc
atactgcagtccatcattgatgccacgacaggcgcatctactcctgcttctggcgtatcg
cttcgcggacccgacattgttccctttgaaaattcactacaagcacgtgtgcggagagac
ctgaacagcttctcagaagcctttgagcaactacaaatcgaatcgcagtccattccaccc
caggagtatgcgctacagaaggagcttgaggctttggaaagacaaatggacgagctcgag
gatttgcattcacgaattcagtcattgcgcactggtacatttggggctgtctgcgaaggg
ctcaagagtctgcgcgctgcatatccatcgaaaccactgcatcgcgagtcgatcgctgtt
atacttccacacttttccaaggccacggcttcatgggacccgctcgaggatgcgcttgaa
gatatggcagcagcctttgcggaactggccgatatcatacagcctcgaagcagaagaatc
gtgtctcaagcctacacccatccttcagaagcactggttaatcagaacacagttgaggag
gaagatacaatcaagcgtggaactacatcggcatacgaatctatgatgctgaaattgtgg
cttcctcccgtcagctcagcagtgacacaatgggatgtgaagcatgcgcgtcctctgttg
catttggtggaagtgtggacaccggttcttccaccttttgtgagcaaacgagtgcttgaa
caggttacgcggaagctattgacttctattcatgagtggaatcctcgaaagttcaagaag
agcccacacacatgggtcatggagtggcttccgttcctcaggcctgcagatctggatccc
aagggatctgggcttgttgctgaaatcaagcgtaagattcgtcacgcactacactcgtct
gatctctccaagggaccactgcccggaatggaccagtggcgaaggctttttggcaagggc
gagtttgatcacttgcttacctcgcatctattaccacgcttggcagcccatgtacgagac
cactttgaaatcgaccctaacgaacagcaagatgtcgcaccgctgaaggcagtgttttca
tggaaagggctgttatcgaacgaggccattggggaggtattacgggcgcatttctttccc
aagtttctcgcaattacgcatgaatgggtgtcgagcaaagaggtcgtgtttgcagaagtc
cgggcttggcttgcgtggtggaggaacgacgtgcaaaaggaactgagcaacgtgccctct
gtagaattgggttggaaggaagcatacacgcttgcttaccaggcagagaaacttggtgag
gcgaggttaacagacctcccgacacctcagatggagagtactggaccctctgtagaaacg
atacgaccggccaagccagccaacaaggagccagtaccatctgcgccgccagcacgagaa
caaacattcaaggacacggtagagcgattttgtgaagaggagaatctgctcttgattccg
ctgcgtgaggcacacgagcagacggcactgccgctcttccgcatcacggcaagcgcgacg
ggacgtggaggtgcggtagtctatctcaaagatgatgatgtgtgggtgcagaacaaaaaa
gataggagcgtgtgggatccggtagaactgggcgaaatgctcattgccaaggccgagggc
aagtga
DBGET
integrated database retrieval system
