Bipolaris oryzae: COCMIDRAFT_27755
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Entry
COCMIDRAFT_27755 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K15147
mediator of RNA polymerase II transcription subunit 5
Organism
bor
Bipolaris oryzae
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bor03021
]
COCMIDRAFT_27755
Transcription machinery [BR:
bor03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
COCMIDRAFT_27755
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med5
RdRP_4
VitD-bind_III
DUF6448
Motif
Other DBs
NCBI-GeneID:
19121180
NCBI-ProteinID:
XP_007689680
JGI:
Cocmi1_27755
UniProt:
W6Z243
LinkDB
All DBs
Position
Unknown
AA seq
1047 aa
AA seq
DB search
MDSMVKEWTVLLDRCLERRVQSDVFAAAVAQLHAKSPLPGRKLAALLLRPRVADNSNIDP
RTVIYLEQLLSLKKLDASDVLIVALLYSKVRLPVKTEEKPSKDAKWSNPPELEELIFHRL
HKVFASEERPVNNVEAVHTLAVVARWMQAMVTSHTSDTMIQAMAGIQQPQQQSINVREGL
AMLVVGVIENSKILRILNHPKAEEVRKELMKSLSSFIPFLSNNSAGSQTSLSLANRLEIS
QKQHDLYEKLPNVNGEGNESAGLEVAALQLDAVMELPQANTRAGLYVFLNSLLVARPLTD
DFVIISHLHTRYKLEPQNMATDLITAAFDILANAMYRNEPTQTLFYLKSFLINKIPTLLT
QISGSIFPMTVEMCITQALSHVDPNAFPSFSQGFDDIMGSNNSLSDVRQDYLNACVLHGL
LPAGTVERLLGEAPMQGPPAKRYERKELLNQCKSNFDKVSVYIDELENLDGNAGAIVAAV
ADFISHLCDTQTTMYLKQLCCLIFKKPQAMDVMLQFTSPASILQPLCQFLEDWHYDSDQG
EYQPLYDEFGAILVLVMAFVYRYDLVYHDIGIAHDTFIAKLLQHGHHSIPPDELTEEQGR
HLGSWLKGLYDSDKEGLSNEVFASCRPQEFYLIVPTLFHQTVVACSLGVLSFETVKGGLE
YLGETFLMPSLIGGLTWMASYALLQTHNDLDAMTRIFNAILLSAPSSGDAQAMHSTIIAM
VSSRLEKCFRTLQRREPNRNNFDSFLQAIKVHAHYERTVFATMKELDQWTNAPNSTLNTS
LRHTVQQLSQWASTASMQPNPPSYTHRQLYASLKMLGAARTLRAIVDEVKTQTDSGNGAA
ALDVGVSIICAPTVEDSPISVDWVGSTVPAPTPQRTRMNLREMLKQDFDNAASLVATDPL
AAETIVRLHRRVEAHFTSLAESGLQAPPINIPSVNMADMQSQSISEHLNRAMDDAAAASM
VEDISNMDNKALQRSMDELASTEGLDLSGIGMGNGDAGTGDMSTDLGNLPDLDLGDMGGM
GIDMDMNMDMGGGGGGDDDWGLDFDNM
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atggattccatggtcaaggaatggacagtgcttttggaccgttgtttggagcgccgcgtc
caatctgatgttttcgctgccgcagtcgcgcagctacacgccaagtctccactgccaggc
cggaaactcgccgctctgctgcttcgcccacgcgtcgcagacaacagcaatatcgaccca
cgcactgtaatttacctcgagcaactcttgtcgctgaagaagcttgatgcctcggacgtt
ttgattgtcgcacttctgtactccaaagtccgactaccggtcaagacagaagagaagccc
tcaaaagatgcaaaatggagcaatccaccagaattggaagaactcatttttcatcgtttg
cacaaggtctttgcttcagaggaacgtccagtcaacaatgtcgaggctgtgcatacccta
gctgttgtagcgcgatggatgcaggcaatggttacctcgcataccagcgataccatgatt
caggccatggctggcatacaacagccacaacagcagtccatcaacgtgcgagagggtctc
gcgatgctcgtggttggagtaattgagaattccaaaatcctccgaattctaaatcaccca
aaagccgaagaggtgcgcaaggaactcatgaaatctctctcatcattcatcccatttctt
tcaaacaactcggcgggatcgcagacatctctgtcgttagcaaacagattagagatctcg
caaaaacaacacgacttgtacgaaaagcttccaaacgtcaatggcgagggaaacgagagc
gctggtcttgaagttgctgcacttcagcttgatgcagtaatggagctgccacaagcgaat
acacgggctggtctatacgtatttctgaattcattacttgttgcacgaccactaactgat
gactttgttatcattagtcacctccatacgcgttacaagctagaacctcagaacatggca
accgatctaatcacggctgctttcgacattctcgccaatgccatgtaccgcaatgagccc
actcaaaccttgttctatctgaaatctttcttgatcaacaagattcctactctcctaacg
caaatttccggctcgatatttccaatgacagttgagatgtgtatcactcaggcgctgagc
cacgtggatccaaacgctttcccgtctttctcgcaaggcttcgacgatatcatgggaagc
aacaattctctttcagatgtcaggcaggactatctcaatgcctgtgtgctccatggtctc
ctgccagcgggtactgtggagcgcctcttaggggaagcacctatgcaaggaccacccgca
aagagatacgagaggaaggaattgctcaaccagtgtaaatctaatttcgacaaggtcagc
gtatacattgatgaactcgagaatcttgatgggaacgctggcgccattgttgcagctgtg
gcagacttcatttcacatctctgcgatacacaaacgactatgtatctcaagcaactttgc
tgtttgattttcaagaaaccccaagcaatggatgtgatgctacaattcacctccccggcg
agcatactacaaccgttgtgccagtttctggaagactggcattatgatagcgatcaaggt
gaataccaacccttatatgacgagtttggcgctatacttgttcttgtcatggcttttgta
taccgctatgatctggtataccatgacatcggaattgctcacgatacatttatcgcgaaa
ctattgcagcatggacaccacagtataccgccagatgagttgaccgaagagcagggcaga
catcttggaagctggctcaaaggtctctatgactcggataaggaaggcttgagtaacgaa
gtctttgcgtcgtgtcgaccgcaagagttttacttgatcgtaccaacccttttccatcag
acagtggtggcttgctccctaggtgttttgtcttttgaaaccgtcaaaggtggtctagaa
tatctgggtgaaacattcctcatgccgtcgctaatcggaggcttgacctggatggcttcc
tatgccctattgcagacccacaacgacctggacgcaatgacacgcattttcaacgcgatt
ttactctccgcaccgtcatccggagacgcacaggctatgcactccactatcatagcaatg
gtatcaagccgcctggagaagtgctttcgtacactgcagcgacgagaaccgaatcgcaac
aacttcgactcctttttgcaagccatcaaagtgcatgcgcattatgaacgcaccgtgttt
gccaccatgaaggagctggatcaatggacaaatgcgcccaacagcacattgaatacttca
ctgcgacacacagtgcaacagctctcacaatgggcttcaacggcttcgatgcaaccaaac
ccgccaagctacacacaccgtcaattatatgcttcgttgaagatgctgggtgcggcccgg
acattacgggctattgtagacgaggtgaagacgcagactgacagcggtaatggagcagcg
gcactcgatgttggggtatccataatctgcgcgccaactgttgaggacagccccatctcg
gtagactgggttggaagcacagtaccagcgcccacaccgcagcgaacgcgtatgaaccta
cgggagatgctgaagcaggatttcgacaatgcagccagcctagtcgctaccgaccccttg
gccgcggagacaatagtgcgcttacaccggcgtgtcgaagcacactttacatcgctagcg
gagagcgggctccaagcacctccaatcaacataccaagcgtaaacatggcagacatgcaa
tcgcaatccatttccgagcacctgaaccgcgccatggatgacgccgcagccgcaagcatg
gtcgaggatatttccaacatggataacaaggcactccagcgcagcatggacgagcttgcc
agcactgaggggttggacctgtcaggtatcggtatgggtaatggcgatgcaggaactggc
gatatgagcacggatctgggtaacttgccagacctggacctgggcgatatgggaggtatg
ggcatagacatggacatgaacatggacatgggcggaggcggaggaggcgatgatgactgg
ggacttgattttgacaacatgtag
DBGET
integrated database retrieval system
