Bipolaris oryzae: COCMIDRAFT_2869
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Entry
COCMIDRAFT_2869 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
bor
Bipolaris oryzae
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bor03009
]
COCMIDRAFT_2869
Ribosome biogenesis [BR:
bor03009
]
Eukaryotic type
90S particles
Other 90S particles
COCMIDRAFT_2869
Pre-60S particles
Other pre-60S particles
COCMIDRAFT_2869
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
CIS_TMP
Motif
Other DBs
NCBI-GeneID:
19121354
NCBI-ProteinID:
XP_007685205
JGI:
Cocmi1_2869
UniProt:
W6ZEF5
LinkDB
All DBs
Position
Unknown
AA seq
1280 aa
AA seq
DB search
MSLDERLSKIRDNPKLQGQQQTHVLLSAIEDTLRQQNSEFTPTAYFAALLSLLARQITAQ
GIANKDTATATIYLLDLVTPHVPAPLLRSKFTDILTNLAPALTAQDADAPLIRSSIGCLE
SLLLVQDARAWELPQTTISPRRAIAGLLQISVDHRPKVRKRAQEALKKVLANPPPSPALD
HPAADMCAETAQKMLKDIAVEAAAKARKHKGKRDAENKDPDLIHALQLIKTIAMSSGGWP
STKIDVLCELLLNISKSSNEFLTMAAFDIFEVIFAGMANELASAKLPRLLEVISELQPSK
NDSQLLPPWIAVVSRGYEVSAQIEPEETFMKLPDLFTTIAEFLTSSSHNIRISASECLIS
FIVNLIPDSVILEPSVFDEKTLEKVAKVAQDLLSVKYQAAWMEVFNVFAAMFETLRWRSD
PILKPVLRVVGDLRGNDSFAGKKEADAVISKAITAMGPDVVLEILPLNLPRPPPGQTGRV
WMLPLLRDSVHNAKLSHFRKEMVPLSEELYQKVIDHGDKDKTMEIKVFETVVQQIWSILP
GYCDLPLDLIDAFDQTFCEMLANLLYGQADLRTDICRALQNLVDSNKAIVELESEDDLLA
QARISKADAQKNLDHLGNFASNMLAVLFNVYSQTLPQYRGTILRTINAYLSIVPERELME
TFERVATNLEASLPEPGSQTQAAKQKQEIGPNKMPPMSHTLMDLIITIALYLPRDSYRSL
FRMAEIMINRENEPQLQKKAYKLIPRLAESEMGRAALRERNAELQQLLLGSAEKASAPAR
RDRLNALFQVLESLPETDLHFIPSILSEVVISAKETNEKAREAAYNLLVAMGEKMAQGGQ
VVQSKVPNMPADAPTVEASLEEYFTMVSAGLAATTPHMISASITAVTRILYQFHDQISKE
TITNLCDLMDIFLQNPNREIVRSVLGFVKVEVISLPESLVRPRLNTLLRNLMVWSHEHKA
HFKAKVKHIVERMVRKFGVEEVERATPMEDRKLITNIRKTREQRKKKKQQAAEDGEDPAE
KRKGKFESEYDQAVYGSESDESEGDSEDEFVKSQSKQQRGGAKGGNTYIIEDEDEPLDLL
SKRALGNISSTKPLRQRKQPTKIKARTNEDGKLILGESDDETEAKGKKSKKQSADDEDAL
MDIDDQNTSLEAGINAYVDAIRGRDAAQTGQKGRLKFSNKRTHEDDEMDMDDDGAEADWQ
EIRKAKSGSGMGRGGAKSGGAGQKNQRRALGQERSRGGNFSGGEGRGGAKGRIEKTKSPR
GRGGGGFRGKAPSGKWSGPK
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcgacgagagactgtccaagatccgggacaacccgaagcttcaaggccagcaa
cagacccatgtcttgctctcagccatcgaagataccctccgccagcaaaactcggaattc
acaccgacagcctacttcgctgccttgctatcgctactggcccgccaaatcacggcccaa
ggaattgctaacaaggatacggccacagcgaccatctacctgctggatctcgtcaccccc
catgtacccgccccgctgctgcgatccaagttcaccgacatcctcaccaacctcgcgccc
gcccttaccgcacaagacgccgatgcgccattgatcaggtcctcgataggatgtctcgag
tcgcttctgctcgtgcaggatgcgcgcgcttgggagttgccacagacgaccatcagcccg
cgtagggctatcgcgggactactccaaatatcagtcgaccacagacccaaagtgaggaag
agggcacaggaagcactcaaaaaggtgcttgcgaacccgccaccaagccctgcgctagac
catcccgcagcagacatgtgcgctgagacggcgcaaaaaatgctcaaggacatagcggta
gaggcagcagccaaggcgcgcaagcacaaaggaaagagggatgcagaaaacaaggacccc
gacctgattcatgcactgcagctcatcaagacgattgcaatgtcgtctggcggctggcca
agcaccaagatcgacgtgttgtgcgagctgctgctcaacatctccaagtcgagcaacgag
ttcttgaccatggctgcttttgacatttttgaggtcatttttgcaggcatggccaatgag
cttgcgtctgctaagcttcccaggctactcgaagtcatttctgagctgcagccctccaaa
aacgactcacagctgcttccgccctggatagcagtcgtatcacgcggctatgaagtctct
gctcagattgagcccgaagagacctttatgaaattgcccgatttgttcaccaccattgcc
gaattccttacatcctcttcgcacaacatccgcatctctgcctctgagtgtttgatctcg
tttatcgtaaacctcattcccgacagcgttatccttgagccctctgtattcgacgagaaa
acactagaaaaggttgctaaggttgcccaagatctcttgagcgtcaagtatcaagctgcc
tggatggaagtgtttaacgtcttcgccgcgatgttcgagactctaagatggcgctcagat
cctatcctcaagcccgtgctaagggttgttggagacctcagaggcaatgacagctttgcg
ggtaaaaaagaagcagacgcagtcatttcaaaagcaatcactgcaatgggacctgatgtt
gtccttgagatactccccttgaacttgccacggccaccaccaggacagactggacgagtc
tggatgcttccgctccttcgcgattccgtacacaacgctaagctgtcccacttcagaaaa
gagatggttccgttgagcgaagagctctatcaaaaggtcatagatcacggcgacaaggat
aagacgatggagatcaaggtcttcgaaacagtcgtacaacaaatctggtcaatcttgccc
ggttactgcgatttgccattggatttgattgatgcttttgatcagaccttttgtgaaatg
ttggcaaatcttctttatggccaagctgatctacgaacggacatctgccgagctctacag
aatctggtagacagcaacaaagccatcgtggaactggagtccgaagacgacctgcttgcg
caagcccgtatctctaaagctgatgcgcagaagaacttggaccatctcggtaacttcgca
agcaacatgcttgcagtcctattcaacgtatacagccagactctgccgcagtaccgtggc
actatcctcaggactatcaacgcgtatctgagcatcgtgcccgagagggagcttatggaa
acctttgagcgagttgcgaccaaccttgaagcctcactacccgaacctggctcgcagact
caagcagccaaacagaagcaggagataggccccaacaagatgccgcccatgagccacacc
ctcatggatctaatcatcacaattgccctgtacctcccacgcgatagctatcgttcgctt
ttccgtatggccgagattatgatcaaccgagagaacgagccgcaactgcagaagaaagca
tacaagcttattccccggcttgcggaatctgagatgggtcgagcagctttgagagagcgc
aatgcagagctacagcaactgcttctcggaagtgcagaaaaggcatcagctcctgcacga
agagaccgactcaatgcgctattccaggttcttgagtctttgccagagaccgatcttcac
ttcatcccttcaatcctttctgaggtcgtcatctcagctaaggagaccaacgagaaggct
cgagaggctgcctacaacctgctcgtcgcaatgggcgagaagatggcgcaaggtggtcaa
gtggtgcaatccaaggtacccaatatgcctgccgatgctcccacagtagaggcatcgctc
gaggagtacttcacaatggtgtcagctggtctggctgctacgaccccccatatgatttct
gcatccatcaccgccgtcacccgtatactttaccaattccatgaccagatatccaaggaa
acaatcacaaatctctgcgatctcatggatatattcctccagaatcccaatcgcgaaatc
gtccgcagtgtacttggctttgtcaaagtcgaggttatatcactgcccgagtcacttgtt
cgcccgcgcctcaacacccttctcaggaatttgatggtttggagccacgagcacaaggcc
cacttcaaggccaaggtcaagcatattgtagagcgcatggttcgcaagttcggtgtcgag
gaagttgagcgcgccactcctatggaggaccgcaagctaattaccaacatccgtaagaca
cgcgagcagcgcaagaaaaagaaacagcaggctgctgaggatggcgaagatccagctgag
aagcgaaagggcaagtttgagagcgagtacgaccaagctgtatatggcagcgaaagcgac
gaaagcgagggtgactccgaggacgagtttgttaagagtcaaagcaaacaacagcgcggc
ggcgcaaagggcggcaacacctacatcatcgaagatgaggacgagcctcttgatctactg
tctaagcgcgctctcggaaacatatcctcaacaaagcccctgcgtcaacgcaagcagcca
acgaagatcaaggcgcgcacaaacgaagacggcaaactcatccttggcgaatcagacgac
gagacagaagccaagggcaaaaaatcaaagaagcaatctgctgatgacgaggatgcgctc
atggatattgatgaccaaaacacgtcgctggaggcaggcatcaacgcctacgttgacgcc
atccgaggacgcgatgccgctcaaaccggccagaagggacgtctcaagttcagcaacaaa
cgcactcacgaagatgacgaaatggacatggacgatgatggtgctgaggcagattggcaa
gaaattcgcaaagcaaagtccggctcaggtatgggtcgaggcggtgcgaagagtggaggc
gctggacaaaagaaccagaggcgagcattgggccaggagagatcgaggggaggcaatttc
agcggtggagagggtagagggggagcaaagggcaggattgagaagaccaagtctccgcgt
ggtagaggtggaggtgggttcagaggaaaggcaccaagtggaaaatggagtgggccaaag
tga
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