Bipolaris oryzae: COCMIDRAFT_28744
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Entry
COCMIDRAFT_28744 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
bor
Bipolaris oryzae
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bor03016
]
COCMIDRAFT_28744
Enzymes [BR:
bor01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
COCMIDRAFT_28744
Transfer RNA biogenesis [BR:
bor03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
COCMIDRAFT_28744
Prokaryotic type
COCMIDRAFT_28744
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
19121365
NCBI-ProteinID:
XP_007690801
JGI:
Cocmi1_28744
UniProt:
W6Z530
LinkDB
All DBs
Position
Unknown
AA seq
801 aa
AA seq
DB search
MPNSPDDAARPTKRARLNDDSVPTFSASNSAPTVTVQSIPSAPAGIDAELEREVRAGIIE
YVCPDNLGFTGVLKQRYTDFLVNEIGLDGQVLHLRSTEVEAKQSAKATEVKEEAKPVDTG
TKDEKVDTEMKDAETGEATLPVPAAVPTEPKNTETNGEEILGQVKATDQETGESITDEDR
ETLDSIFGRQTTDDIIKLVQQVRKRESKKAKDFKPVISPPITDKDMRTKAHQSLRRIFPN
LLESAMENDQSIRIKATPPAERKNKKAKGGNRDREDQGRRRGGLDWEELGGEYLHFNLYK
ENKDTMEVVGFLGSKLNCGAKGFGFAGTKDRRACTVQRVCVKRQTAQRIQSFNKVLFNAA
VGDFEHSHHDIKLGDLMGNEFTITLRDCHFQSEEGLDFEQRQKLANDVVRKAITDFSEKG
FINYYGLQRFGSFAASTDAIGRKMLQDDLKGAVEDLLAYSDVALAAADGTSTDPTIQVSQ
DDRNRTKALHIWKTTGNGSEALNLLPRKFTAERNIIQHLSSRNSKTGRHDRKTDWQGALM
TIPRTLRLMYVHAYQSLVWNTVAGKRWATYGSSVVEGDLVLVHEHRDKEINPTTQKQQPD
ASLDQDGETIINPAGTENALAPESNFERARPLSAAEAASGAYTIYDVVLPQPGFDVEYPP
NAIGAFYKTFMASEAGGGLDPQNMRRSWREVSLSGGYRKFLARPLREVQSEVFGYARVDE
QFVRTDLEVLREREEIAKAETEAKTELEREREEGEQKEEKDKIAVVIKLQLGSSQYATMA
LRELMKAGGVKAFKPEFMGGR
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgccaaactctccggacgatgccgcgcggcccacgaaacgtgcgcgacttaacgatgat
tctgttcctacgttctccgcaagtaactctgcgccaacagtaacagtacagtctattccc
tctgcacctgcaggaattgatgccgagctggagcgcgaagtgcgcgctggaataatcgag
tatgtatgcccggacaatctcgggttcacgggcgtgttgaagcagaggtataccgatttc
ttggtcaacgagattggactcgacgggcaggtactgcacctgagaagcacagaagtggaa
gcaaaacagagtgcaaaggcgacagaagtcaaagaggaagcaaagccggttgatacgggt
acaaaagatgaaaaggtcgacacagaaatgaaggatgcggaaactggagaggcgacgctg
cctgtaccagcagcagtacctaccgagcccaagaacaccgagaccaacggcgaggaaatt
cttggacaggtcaaggctaccgaccaagagacaggagaatctattacagacgaagaccgc
gaaacactagattcgatatttggtcgccagactacggatgacattattaaacttgtgcaa
caagtacgaaagcgagaatcgaaaaaggctaaagactttaagccagtcatatcaccgccc
attacagacaaagatatgcgtaccaaagcacatcaaagccttcgtcggatatttcccaac
ttgctagagagtgccatggagaatgaccaatcaatccgcattaaagccacgcccccagca
gagcggaagaacaaaaaggcaaagggaggaaatcgggaccgagaggaccagggcagacgg
agaggcggtttggattgggaggagttgggtggtgaatacctgcacttcaatctatacaaa
gagaacaaggacacgatggaggttgtaggctttctcggtagcaagctcaattgcggagcc
aaaggcttcggctttgcaggtacaaaggacaggagggcatgtaccgtgcagagagtgtgc
gtcaagcgtcagacagcgcagcggatacagagtttcaacaaagtgctcttcaatgctgca
gtgggtgactttgagcattcccatcatgacatcaagctgggcgacttgatgggcaacgag
ttcacaatcacactacgagattgtcatttccagagcgaggagggcctagactttgagcaa
cgacagaaacttgccaacgacgtggtccgcaaggccattaccgacttttctgagaaaggg
ttcatcaactactacggcctccagcgctttggctctttcgccgccagcaccgacgccatc
ggccgcaagatgctccaagacgacctcaaaggcgccgtcgaagacctcctagcatacagc
gatgtcgccctcgccgccgccgacggcacctcgactgacccaaccatccaagtctcccaa
gacgaccgcaaccgcaccaaagccctccacatctggaaaacaacaggcaacggcagcgaa
gccctaaatctcctcccccgaaaattcaccgccgaacgcaacatcatccaacacctcagc
tcccgcaacagcaaaaccgggcgccacgaccgcaaaaccgactggcaaggcgccctcatg
accatcccccgcaccctccgcctaatgtacgtccacgcctaccaatccctcgtctggaac
accgtcgccggcaagcgctgggcaacctacggctcctcagtcgtcgaaggcgacctcgtc
ctcgtccacgaacaccgcgataaagaaatcaaccctaccacacaaaagcaacaacctgat
gcaagtttggatcaagacggcgaaacaataatcaaccccgccggcaccgaaaacgctctt
gcccccgaatcaaactttgagcgcgcacgccccctttccgccgccgaagctgcgtcgggt
gcctacacaatctacgacgttgtactcccccagcccggcttcgacgtcgagtacccaccc
aacgccatcggcgccttctacaagacattcatggcaagtgaggcgggtggcgggctcgac
ccccagaatatgcggcgctcgtggcgagaagtcagtctaagtggtgggtatcgcaagttt
ctggcgagaccgctcagggaggtgcaaagtgaggtgtttgggtatgcgagggtggatgag
cagtttgtgcggacggatttggaggtgttgagagagagggaggagattgcaaaggcggag
acggaggcgaagactgagttggagagggagagggaggaaggagagcagaaggaagaaaag
gataagattgccgtggtgattaagttgcagcttggaagtagtcagtatgctaccatggcg
ctgcgggagttgatgaaggcggggggtgtcaaggcgtttaagccggagtttatgggggga
cggtag
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integrated database retrieval system
