Bipolaris oryzae: COCMIDRAFT_28756
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Entry
COCMIDRAFT_28756 CDS
T03125
Name
(RefSeq) polysaccharide lyase family 4 protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
bor
Bipolaris oryzae
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
COCMIDRAFT_28756
Enzymes [BR:
bor01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
COCMIDRAFT_28756
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Ortholog
Paralog
GFIT
Motif
Pfam:
fn3_3
CBM-like
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
19121369
NCBI-ProteinID:
XP_007690832
JGI:
Cocmi1_28756
UniProt:
W6YT41
LinkDB
All DBs
Position
Unknown
AA seq
664 aa
AA seq
DB search
MRAISVTVTLLFCANTWAFLKASQNNQSLTIANDRLVASVSKSKGYINVLTLDGQNLLGT
ESGNTGVGPYLDCYCTPSGFWTPGRGKDVQYQLFNGTDSTGTPYGGISMGETYAPTGQRL
EQYWFLKEGETGLHTFSRIVYHNETTPFLRNLQEFRTLFRPNHDPPLFTHFVTNDKFSAP
RPDTNGQAVVQDATWQLANKDDPYVKGVGDYFTKYTFQDSWRNHLAHGMYADGRTTNGTT
YGAWLVHNTVETYFGGPTHSDLVVDGIVYNYMVSNHHGAQTPNITNGFDRTFGPQYFHFN
TGGTLDELRKDAEQYGQRPDWNAPFYDSIAAHVPNLLPSSHRGTFEATISLPAGAQNPIA
ILTTTGHNYQDNAANSTAYQYWTPIPSSGTISIPRVKPGSYRLTLSATSIFGDTTHDSIS
ISASHTTTLNMTWTPESAGKELFRIGTPDKSSGEFRHGTSPSPTHPLLTEEYRLYWAAYD
FITDFPSGVRFKVGGQDDESTALNYVHWAVFGGKGNSLRPVPVPDHVYDWSIVFELPKEE
GQGGARGKKATFTVQLAAAKTAAGNTDVNSGEEEWADLPLSVRVNGVGVGVWVIPYYQSS
SCAVRSAVSCYHLAHKFEFSGDLLKEEGENEIVLSLPYNATDSESAVLPEAVYVQYDAFR
LEVE
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgccatttcggtcacagtgacgctactgttctgtgctaatacatgggcctttcta
aaagccagtcaaaacaatcagagtcttactattgctaacgaccggctggttgcatcggtg
agcaaatcaaaagggtatatcaatgttttgacgctcgacggccaaaaccttcttggaaca
gaatctggtaacactggtgttggaccatatcttgattgctactgtactccgagtggtttc
tggacgcctggtcgtggtaaagatgttcaatatcaattattcaacggcaccgactcaacc
ggcaccccatatggcggtatcagcatgggagaaacgtatgcgcctaccggccaacggctg
gagcaatactggtttctaaaagaaggcgagactgggcttcatactttcagccgaatagta
taccacaacgagactacgccatttctgcggaacctgcaggagttccggactctattcaga
cccaaccacgaccctccactcttcacccactttgtcaccaacgacaagttttccgcaccc
cgtccagatacaaatggtcaagcagtcgttcaagatgctacctggcagcttgccaataaa
gacgatccatacgtaaaaggcgtaggcgactacttcaccaagtacaccttccaagacagc
tggcgcaaccacctcgcccacggcatgtacgccgatggccgcaccacaaacgggaccacg
tacggcgcctggctcgttcacaacaccgtcgaaacctacttcggcggtcccacacactca
gacctcgtcgtggacggcatcgtctacaactacatggtctccaaccaccatggcgcccaa
accccaaacataacaaacggcttcgaccgcactttcggcccacaatacttccacttcaac
acgggcggtacactggacgaactgcgtaaagacgcagagcaatacggtcaacgcccagat
tggaacgcacccttctacgactccatcgccgcccacgtcccaaatctccttccatcatcc
caccgcggcaccttcgaagcaaccatctctctccccgccggtgcccaaaaccccatcgcc
atcctcaccaccaccggccacaactaccaagacaacgccgcaaacagcaccgcataccaa
tactggacgcccatcccctcttccggcaccatctccatcccccgcgtaaaacccggatcc
taccgcctcaccctctccgcaacctccatcttcggcgacaccacccacgactccatctcc
atctccgcctcgcacacaaccacactcaacatgacctggacccccgaatccgccggtaaa
gaactcttccgcataggcacccccgataaatcctctggcgaatttcgccacggcacctcc
ccttcccccacccaccctttgctaaccgaagaataccgactctactgggccgcctacgat
ttcatcaccgatttcccctcgggcgtgcgcttcaaggtgggaggacaagatgacgagagc
acggccctgaattatgtccattgggctgtttttgggggtaaagggaatagtctgaggcct
gtgccggtgcctgatcatgtttatgactggagtatagtgtttgagttgccaaaggaggag
gggcagggaggggcaaggggcaagaaggcgacgtttaccgtgcagcttgcggccgcgaag
acggcggcggggaataccgatgtgaattcgggcgaggaggagtgggcggatttgccgttg
agtgtgcgggttaatggcgtgggcgtgggcgtgtgggttattccatactaccagtcttca
tcctgcgcggtgcgttcagccgtgtcgtgctatcatttggcgcacaaatttgagttttcg
ggggatttgctcaaggaggaaggggagaatgagattgtgctgagtctgccgtataatgcg
acggatagtgagagtgcggtattgcccgaggcagtgtatgtgcagtatgatgcgtttagg
ttggaggtggagtaa
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