Bipolaris oryzae: COCMIDRAFT_28931
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Entry
COCMIDRAFT_28931 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
bor
Bipolaris oryzae
Pathway
bor03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
COCMIDRAFT_28931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bor03021
]
COCMIDRAFT_28931
03036 Chromosome and associated proteins [BR:
bor03036
]
COCMIDRAFT_28931
Transcription machinery [BR:
bor03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
COCMIDRAFT_28931
Coactivators
SAGA/TFTC/STAGA complex
COCMIDRAFT_28931
Chromosome and associated proteins [BR:
bor03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
COCMIDRAFT_28931
STAGA complex
COCMIDRAFT_28931
TFTC complex
COCMIDRAFT_28931
SAGA complex
COCMIDRAFT_28931
SLIK complex
COCMIDRAFT_28931
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
Bromo_TP
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
19121408
NCBI-ProteinID:
XP_007691030
JGI:
Cocmi1_28931
UniProt:
W6YSM1
LinkDB
All DBs
Position
Unknown
AA seq
476 aa
AA seq
DB search
MSSVWNPDNVRDVAESVGIASLADNVVEELARDVDFRLAQVLEEALKFMRHGKRTTLSTQ
DISNALKVLNVEPLYGYESTRPLRFGEASLGPGQPLYYVEDEEVDFEKLINAPLPKVPRE
ITFTAHWLAVEGVQPSIPQNPNTNTADLLPKGPNANPHLAAANGLDNVNVKPLVKHVLSK
ESQELFNKLSGALVDETNIEWQNAALAAISTEPGIHQLTTYLLSFIAEKVTHNMKNLFIL
SQMMRASEALLNNQAIYLDPYIAYMVPPILTCCIGGKLGPANQPAPSNASSETLGGAVPD
YSRAASDAFYLRTLAAHLLRNICRKYSSSNQGLKSRIARTCLKQFMDPDKTVGAHFGALQ
ALLLVLGPSDALRGLILPNIKMYSEDFLAKKLADESTRHDAEILLEVLVGSFPALVPKAV
RERAEKAKREGTYTAPNLEDVREKLVDKVGDLVAGRIISKKMDLEAHELLSKDFDI
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcagtctggaaccccgacaatgtacgagacgtggccgaatcagtaggcattgcc
tcactcgccgacaacgtcgtcgaagagctagcccgtgacgtcgactttcgtctggcccag
gtcctggaagaagcgctcaagttcatgcgacacgggaagcggacaacactgagcacacag
gacatatccaatgccctcaaggtgctcaatgtggagcctctctacggctacgaatctacc
cggccgctgcgcttcggcgaggcttcactggggcctggccagcccttgtactatgtcgag
gatgaggaggtcgatttcgaaaagctcatcaacgctcccctgcccaaggtgccacgggaa
atcaccttcacagcccactggctcgccgtagagggagtccagccatccataccccagaac
cctaacaccaacactgccgacttgttacccaagggccccaacgcaaacccacatctggct
gctgccaacgggctcgacaacgtcaacgtcaagcccctcgtcaagcatgtgctgtctaag
gaatctcaagagctgttcaacaagctgtcgggcgctcttgtcgacgagacaaacattgag
tggcagaatgcagccctggccgcaatttcgacagagcccggtattcatcagctgacaaca
tatctcttgagcttcatagccgaaaaggttacacacaatatgaagaacttgttcatactc
agccaaatgatgcgcgcttccgaggccttgttaaacaaccaggccatttacctcgaccca
tacattgcctacatggttccacctatcctgacttgctgtattggtggaaagctaggacca
gcaaatcaacccgcgccctccaatgcctcttccgagactctgggcggggcggtacccgac
tacagccgcgctgcttctgatgcattttacctgcgaacacttgcagcacaccttctccgg
aatatttgcagaaagtactcgtcatcaaaccagggattgaaatcccgaatcgcccgcaca
tgtctgaagcaattcatggaccctgacaaaacagtgggcgcgcattttggcgctctgcaa
gctctgctcctcgtccttggtccttctgatgctctccgaggattgattctacccaacata
aaaatgtacagtgaggattttcttgccaagaagctggccgatgagagcacgcgccatgac
gcagagatactgctcgaagtactcgtcggttccttccctgctctcgttcccaaggcagtc
agagaacgggccgaaaaagcaaagagagagggaacatacacagcacctaatcttgaggat
gtgcgagaaaaactggtagacaaagttggtgatctggtggccgggcgtatcattagcaag
aagatggacctggaagcgcatgagctgctgagcaaggattttgacatttga
DBGET
integrated database retrieval system