KEGG   Bipolaris oryzae: COCMIDRAFT_28931
Entry
COCMIDRAFT_28931  CDS       T03125                                 
Name
(RefSeq) hypothetical protein
  KO
K03131  transcription initiation factor TFIID subunit 6
Organism
bor  Bipolaris oryzae
Pathway
bor03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:bor00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    COCMIDRAFT_28931
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bor03021]
    COCMIDRAFT_28931
   03036 Chromosome and associated proteins [BR:bor03036]
    COCMIDRAFT_28931
Transcription machinery [BR:bor03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     COCMIDRAFT_28931
   Coactivators
    SAGA/TFTC/STAGA complex
     COCMIDRAFT_28931
Chromosome and associated proteins [BR:bor03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     COCMIDRAFT_28931
    STAGA complex
     COCMIDRAFT_28931
    TFTC complex
     COCMIDRAFT_28931
    SAGA complex
     COCMIDRAFT_28931
    SLIK complex
     COCMIDRAFT_28931
SSDB
Motif
Pfam: TAF6_C TAF Histone TFIID-31kDa Bromo_TP CBFD_NFYB_HMF
Other DBs
NCBI-GeneID: 19121408
NCBI-ProteinID: XP_007691030
JGI: Cocmi1_28931
UniProt: W6YSM1
LinkDB
Position
Unknown
AA seq 476 aa
MSSVWNPDNVRDVAESVGIASLADNVVEELARDVDFRLAQVLEEALKFMRHGKRTTLSTQ
DISNALKVLNVEPLYGYESTRPLRFGEASLGPGQPLYYVEDEEVDFEKLINAPLPKVPRE
ITFTAHWLAVEGVQPSIPQNPNTNTADLLPKGPNANPHLAAANGLDNVNVKPLVKHVLSK
ESQELFNKLSGALVDETNIEWQNAALAAISTEPGIHQLTTYLLSFIAEKVTHNMKNLFIL
SQMMRASEALLNNQAIYLDPYIAYMVPPILTCCIGGKLGPANQPAPSNASSETLGGAVPD
YSRAASDAFYLRTLAAHLLRNICRKYSSSNQGLKSRIARTCLKQFMDPDKTVGAHFGALQ
ALLLVLGPSDALRGLILPNIKMYSEDFLAKKLADESTRHDAEILLEVLVGSFPALVPKAV
RERAEKAKREGTYTAPNLEDVREKLVDKVGDLVAGRIISKKMDLEAHELLSKDFDI
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgtcctcagtctggaaccccgacaatgtacgagacgtggccgaatcagtaggcattgcc
tcactcgccgacaacgtcgtcgaagagctagcccgtgacgtcgactttcgtctggcccag
gtcctggaagaagcgctcaagttcatgcgacacgggaagcggacaacactgagcacacag
gacatatccaatgccctcaaggtgctcaatgtggagcctctctacggctacgaatctacc
cggccgctgcgcttcggcgaggcttcactggggcctggccagcccttgtactatgtcgag
gatgaggaggtcgatttcgaaaagctcatcaacgctcccctgcccaaggtgccacgggaa
atcaccttcacagcccactggctcgccgtagagggagtccagccatccataccccagaac
cctaacaccaacactgccgacttgttacccaagggccccaacgcaaacccacatctggct
gctgccaacgggctcgacaacgtcaacgtcaagcccctcgtcaagcatgtgctgtctaag
gaatctcaagagctgttcaacaagctgtcgggcgctcttgtcgacgagacaaacattgag
tggcagaatgcagccctggccgcaatttcgacagagcccggtattcatcagctgacaaca
tatctcttgagcttcatagccgaaaaggttacacacaatatgaagaacttgttcatactc
agccaaatgatgcgcgcttccgaggccttgttaaacaaccaggccatttacctcgaccca
tacattgcctacatggttccacctatcctgacttgctgtattggtggaaagctaggacca
gcaaatcaacccgcgccctccaatgcctcttccgagactctgggcggggcggtacccgac
tacagccgcgctgcttctgatgcattttacctgcgaacacttgcagcacaccttctccgg
aatatttgcagaaagtactcgtcatcaaaccagggattgaaatcccgaatcgcccgcaca
tgtctgaagcaattcatggaccctgacaaaacagtgggcgcgcattttggcgctctgcaa
gctctgctcctcgtccttggtccttctgatgctctccgaggattgattctacccaacata
aaaatgtacagtgaggattttcttgccaagaagctggccgatgagagcacgcgccatgac
gcagagatactgctcgaagtactcgtcggttccttccctgctctcgttcccaaggcagtc
agagaacgggccgaaaaagcaaagagagagggaacatacacagcacctaatcttgaggat
gtgcgagaaaaactggtagacaaagttggtgatctggtggccgggcgtatcattagcaag
aagatggacctggaagcgcatgagctgctgagcaaggattttgacatttga

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