Bipolaris oryzae: COCMIDRAFT_29707
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Entry
COCMIDRAFT_29707 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K14855
ribosome assembly protein 4
Organism
bor
Bipolaris oryzae
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bor03009
]
COCMIDRAFT_29707
Ribosome biogenesis [BR:
bor03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
COCMIDRAFT_29707
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR36-Utp21_2nd
WDR55
DSE1_N
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
ASA1
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_Aladin
WDR90_beta-prop_4th
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
CFAP251_N
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_WDR19_1st
PAC11
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_2nd
Beta-prop_Vps41
Beta-prop_NOL10_N
Beta-prop_HPS5
WD_LRWD1
WD40_RFWD3
Beta-prop_DCAF12
Beta-prop_WDR11_2nd
TRM82_WD
PROPPIN
NLE
Beta-prop_ACSF4
Beta-prop_NWD2_C
Tricorn_N
Beta-prop_IP5PC_F
PsaD
Motif
Other DBs
NCBI-GeneID:
19121554
NCBI-ProteinID:
XP_007691945
JGI:
Cocmi1_29707
UniProt:
W6ZCS2
LinkDB
All DBs
Position
Unknown
AA seq
511 aa
AA seq
DB search
MATLYPPPSKRQKRAQAEVARQQQDIDSSIPDGTVRVRFVDQATGESGNLPVLTVPLSQA
STKNLELLLNNLKDQADDQIPYRFFPDGTTEALADKDDLYNALVKPGKASAEAEIVLQYA
PQAVFRVKAVSRCSAAVSGHGDNILSINFSPVSSSRMASGSGDKTVRVWDCDTGTPVHTM
KGHSGWVLAVSYSPDGSLLASGGYDREVRIWDPNTGKQIGGPLKGHTGFITSLSWEPYHL
QEPGRPRVASSSKDGTVRVWDAIGNRIDFALSGHKGNVTCVKWGGTGRMYTASHDKTIKV
WDAAKGTLINTLQGHAHWVNHLALSTDFVLRTSYHDHTRKVPATQEEKLAKAKARFEKAA
TINGEVIERLATASEDCTIILWTPLTSTKPVNRMTGHQKQINQVTFSPDGSMLASGAWDN
HVKLWSARDGKFIDTLRGHVGPVYMTCFSADSRLLASCSKDTTLKVWDMRTRKLKEDLPG
HKDQVFALDWSPDGERVGSGGADKQVRIWSN
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccctatatccacctccgtcgaagcgtcagaagcgagcgcaagccgaagtcgcg
cgacaacaacaagacattgacagctccatacccgatggcacagtgcgagtgcgcttcgtg
gaccaggccacaggcgaaagcggcaatctccccgttcttactgtcccattatcgcaggcg
tcgaccaagaatctggagctgcttctgaacaacttaaaagaccaggcagacgaccaaata
ccgtatcggttctttcctgacggtacgactgaagcgcttgcagacaaggatgatctgtac
aacgcgctagttaagccaggaaaggcatcagcagaagccgagatagtactccaatatgcg
ccacaagctgttttccgtgtcaaagcggtctcgcggtgctcagcagctgtgtcaggacat
ggcgacaacatcttgtccataaacttctcgccagtcagctccagcaggatggcgagtgga
agtggagacaagacagtcagggtatgggattgtgacacaggcacaccagttcatacgatg
aaaggacattcggggtgggttctggctgtcagctactcacccgacggctccctgctagca
tctggtggatacgacagagaggtgaggatatgggacccaaacacgggaaagcagattgga
ggcccgctcaagggccatactggcttcatcacatccctctcctgggaaccatatcacttg
caagagcccggccgaccgcgagtagcatcgtcatccaaggacggtaccgtaagagtgtgg
gacgcaataggcaacagaattgatttcgcactgtcaggtcacaagggcaacgtgacttgc
gtaaaatggggtggtactggacggatgtatactgcctctcacgacaagaccatcaaggta
tgggacgcagcaaaaggcacattgatcaacacgctacaaggccacgcgcattgggtcaat
caccttgccctctccacggacttcgtcctgagaacctcgtatcacgatcatacgcgcaag
gtgccagccacacaagaagagaagcttgccaaagcgaaagcaagattcgagaaagccgcc
acgatcaacggtgaagtaatagagcgcttggcaactgcctctgaagactgcacaatcata
ctatggacacccctgacaagcacgaaacccgtgaataggatgaccggccatcagaagcag
atcaaccaagtaaccttctcgcccgatggttccatgttagcatcgggagcttgggataat
catgtcaaattgtggtcagctcgagatggaaagttcatcgacaccctcagaggacatgtc
ggtcctgtatatatgacgtgcttctctgctgatagccggctactggcgagctgcagcaaa
gacacgacattgaaggtgtgggacatgagaaccaggaagctgaaggaagacttgccagga
cacaaagaccaggtgtttgcgctagactggagtccggacggagagagagtcgggagcggt
ggtgcagacaagcaagtgcggatttggagcaactaa
DBGET
integrated database retrieval system