Bipolaris oryzae: COCMIDRAFT_32091
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Entry
COCMIDRAFT_32091 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K14301
nuclear pore complex protein Nup107
Organism
bor
Bipolaris oryzae
Pathway
bor03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
COCMIDRAFT_32091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bor03019
]
COCMIDRAFT_32091
03036 Chromosome and associated proteins [BR:
bor03036
]
COCMIDRAFT_32091
Messenger RNA biogenesis [BR:
bor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
COCMIDRAFT_32091
Chromosome and associated proteins [BR:
bor03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
COCMIDRAFT_32091
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup84_Nup100
MRP-S27
EF-hand_like
Motif
Other DBs
NCBI-GeneID:
19122024
NCBI-ProteinID:
XP_007682851
JGI:
Cocmi1_32091
UniProt:
W6ZKF8
LinkDB
All DBs
Position
Unknown
AA seq
1029 aa
AA seq
DB search
MALRPFSRQSQSTAAQSPNSNALLFGASRPTNGTTSNDPLQPLRAMADRVGKEVEKFAER
VDHWHTHGNESKMAKYHTTVKLVGKFQDVAESHVKELKRTTEAENKGSLSKTIRRQIQTM
ADASENAPQSLFAQSSQSVNSSIENNTAPVSANVQELREWQAELATWKLLKLVIEHYHPD
PDTDVTAEKKARLETAGGTARYCKNSEIWDRFILEDDQAKEKALVLRWLEQTARDSESDV
KAITAALEEHSGKGAHTWTSGWLDTKAKIKQAKRMEGADQPLKPANTNIQTSDKTANLVT
QLDPDAPSRQKRALEKNDEYYERSLWMVAYEMMRRGLPWTTIVDWCYERNESWRGVSIGA
AYESHPEGGPNVAGPTVGYLFRRMCFYAARGARIPYEGAVYGLLSGDLKQVQAVCRSWDD
HLYAHYNALLLSRFDTYLQRNYPAKVTESLTQKFLFQDAVANIGDWEASPEKVIGILKQQ
RSTASQAVSPIKLIQGALIGRDADDLMLKVGMALADMFAQDKRPHSLIIHPDSPEEDRSP
IPAGEYRTFEAERYYQSLVKDPHAFRILVHIFIVLRNGLHTLFEDTQQDKQFLTMDNVIA
AYIEFLRLTQRFDAIPLYAAQLIEERAAYTLARVLPDIKNSTEQRHCVALMESYRLDVIQ
VVSQSFTFAARDSGFTHFNSAGITVITNPIKRFKILEPVSVPHEQVLWPGVRIKRSFDGE
QISEQDEIIVDALQWYNYIGRDYEHTFEHLNNALTIFLLNGRLAAAEKVINDLSVESLSL
SRTEALTGYPFDLMSPGAEEQDERQLHEHRDSLSAAARAAAVPISQLPDANQHRELVMQL
RQASLPYCNLQQIVRLLVLFREWREEEQALIQIRADRQKETTGAKAKPDTQHTKALLDSI
STIFDTLLPSISIYSAADPHYLTEQTWDLLRAYVPDMILAYLSVLQSASWFLNKDPAIKA
MEVAVVIADKSNEWLQRCLLETGRMSEVLECLAGVSKCMLKLTEGGKEKGNKKRGGKGET
LRIWDLGSR
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggcgttacgacccttctcgcgccagtcgcagtcgactgcagcacagtccccgaatagt
aatgcgcttttgtttggcgcttcccgaccaacaaatggcaccacctccaacgacccgctc
caaccactgcgcgcaatggccgaccgcgtgggcaaagaggttgagaagtttgcagagcga
gtcgaccactggcatacacacggaaatgagtccaagatggccaaatatcacaccacggtc
aagttggtgggcaaatttcaggatgttgcagaatctcatgtcaaggagttgaagcgaacg
accgaagcagagaacaagggcagtctgagcaagactatccggcggcagatacagactatg
gcagatgcgtcggagaatgcgccccagagcctcttcgctcagtcttcccaatccgtcaat
tcgtcgattgagaacaacaccgcccctgtctccgcaaacgtccaggagcttcgagaatgg
caggcagagcttgcaacatggaaactgctcaagctcgtcatcgaacactaccaccccgac
cccgataccgatgtgaccgcagagaagaaggcgcgtttggaaactgctggaggcactgcg
cggtactgcaagaatagcgagatttgggaccgattcatactggaagatgaccaagcgaaa
gagaaggcacttgttcttcgctggttggagcagaccgcgcgagacagcgaaagcgatgtc
aaagctatcaccgcagcactcgaggagcattcgggcaagggcgcgcatacatggacaagt
ggctggcttgacaccaaggcgaagatcaagcaggcgaagcgcatggagggtgccgaccag
ccactaaagcctgccaacacgaacatccagacctcggacaagaccgcgaaccttgttaca
cagctcgacccagatgccccctcaaggcagaagcgtgcgcttgaaaagaacgacgagtac
tatgagcgttccctttggatggttgcatacgagatgatgcgccgtggactgccgtggacg
accattgtggactggtgctacgaacgaaatgaatcctggcgtggagtcagcattggagca
gcatatgagagtcaccccgaaggtggccctaatgttgctgggccaactgttggctatctg
ttccgccgcatgtgtttctacgctgcaaggggggcacggataccttatgaaggcgccgta
tacggtctgttgagtggagacttgaagcaagtacaagcagtttgccgatcttgggacgac
catctttatgcgcattacaacgccctgcttctttcccggttcgacacgtacctccaaagg
aactaccccgccaaggtgacagagagcctgacccaaaagttcctttttcaggatgcagta
gccaacatcggagattgggaggcttcgcccgagaaggttattggtatactaaagcagcaa
aggagtaccgccagccaagctgtctcaccaatcaagctcatccaaggagcgcttatcggc
agagatgctgatgacctgatgctgaaagtcggcatggccctagcggatatgtttgctcaa
gacaaacgacctcacagcctcatcatccacccagattcgccagaggaagaccgatcacct
ataccagcgggagaataccggacctttgaagcggagcgatactaccaaagccttgtaaaa
gatccccacgctttccgaatcttggtgcacatcttcattgttctccgtaatggacttcat
acgctctttgaggatactcaacaggacaagcaattcctaactatggacaatgtcatcgct
gcctacattgagttcctgcgccttactcaacgtttcgatgccatcccgctttatgcggcg
cagctgatcgaagagcgtgcagcatataccctagcacgcgtccttcccgacatcaagaac
agcactgagcagcggcactgcgttgcgctaatggagtcatatcgactcgacgttatccag
gtcgtatctcagagctttacgtttgctgcgcgggatagtggattcacccacttcaacagt
gcaggcatcacagtcatcacaaaccccatcaagcgttttaagattttggagccagtcagc
gtacctcatgagcaagtcctgtggcccggtgtgcgcatcaagcggtcattcgatggcgag
caaattagcgagcaagacgagattattgtcgatgctttgcaatggtacaactacattggc
agggattatgaacacacatttgagcacctcaacaatgcgctgaccatcttccttctcaac
ggtcgcctagctgctgccgagaaggtcattaatgatctcagcgttgagtctctgtcgctg
tcgcgtacagaagctcttactggctatcctttcgatttgatgagtcctggagcagaagaa
caagatgagcgccaactccatgagcatcgagacagcctctcagccgctgcacgagctgct
gcagttcctatttcacaattacctgatgccaaccagcacagagaattggtgatgcaattg
cgccaagccagcttgccatactgcaacctccagcaaatcgttcgcctgctcgtcctcttc
cgcgaatggcgcgaggaggagcaagcactcatacagatccgtgcggaccgtcagaaagag
accactggtgcgaaagcaaaaccagatactcaacacacaaaggctcttttggactctatt
tccaccatatttgacacccttctgccctcgatctctatttattctgctgcagaccctcac
tacttgacagagcaaacgtgggatctcctcagggcttacgttcccgatatgatccttgcc
tatctctccgttctccagtctgcatcgtggttcttgaacaaggatcccgctatcaaggcc
atggaggttgctgtcgtcatagccgataagagtaacgagtggctacaacgctgtctgctg
gaaactggcaggatgagcgaggtattggagtgcttggctggtgtatccaagtgcatgttg
aagctcaccgagggtggcaaggagaagggtaacaagaagcgaggaggcaagggagagacg
ctgaggatatgggatttgggttctagatag
DBGET
integrated database retrieval system
