Bipolaris oryzae: COCMIDRAFT_34256
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Entry
COCMIDRAFT_34256 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K22803
structural maintenance of chromosomes protein 5
Organism
bor
Bipolaris oryzae
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bor03400
]
COCMIDRAFT_34256
DNA repair and recombination proteins [BR:
bor03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
COCMIDRAFT_34256
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_29
NNF2_middle
AAA_21
SUB1_ProdP9
OVT1
AAA_11
AAA_27
AAA
AAA_25
ABC_tran
Motif
Other DBs
NCBI-GeneID:
19122526
NCBI-ProteinID:
XP_007685220
JGI:
Cocmi1_34256
UniProt:
W6ZWN0
LinkDB
All DBs
Position
Unknown
AA seq
1128 aa
AA seq
DB search
MPGLVRRGRKRPSLAVSEQVDKQSDDDSSTSSSKRARHDRDASGSPSPSTYMQNDDADGT
SAYVQDEFQPGSLVRVKLKNFVTYTAAEFHLGPSLNMVIGPNGTGKSTLVCAICLGLGWG
SEHLGRAKDLGAFVKHGASEAIVEIELATGPGNGPNRIVQRTIRKEDNKSVFFLDGKRVS
QVAVTTMAKQFSIQIDNLCQFLPQDRVVEFAKMTDVDRLRETQRAAAPPHMVEWHDELKA
LRIEERNVQTKETNERSHLEKLEKQQNATREDVERFHQREGLLRKSKCLKKVRPMIEIKL
LKNDILKMKEDRRLAMLELDQIKEDMEPARIALSEVETYRNQIEQVVKLRKNRVDLIKTQ
ADKLVKDIDTEKAKASDSTELIKVELRAKKSREQDIVRITADINRLEQKRQNTAVEYDAA
SFESRKAEVRGQISTISNSVTDKQNSISGLRERAHAIADENTKLNTQREQLNTQSGKQAS
LLQRLSPDTAKAWKWIQENKHTLNFKGEVFGPPILECSIPDTRYAQALEGQLRKGDVIAI
TCTHSDDQQLLSNLLLRKVANGGQGLHEVHLRSSPKSLDSYQSPIMKEDLEKFGFQGYML
DFIQGPAAVLAMLCDNNRLHQIAYSPTPISDEQHAAVSNSPIRSWVSGTETFRIVTRREY
NASSTSVTKLRPAQWFTDQPTNTEEVRAIESRITELVQEKEEIQENYAIVTNEMKSLKQE
LEELKQAREAIQAEQDATKKALAEWRAIPDKIASKQAQLDDHKQQNTETNERIREIKTQA
RETSLRVAAQALDYAKAVTHMRTFHESLIEAEIRFIEAKSELNALRNENSAMIQRQQTKE
TEVQELGNRIKRLREEYQKKTAATQQDIETLTEEEKQIVLEYRELPSFDDLEQEVQAVAA
RLEMMAEGNPGAIRAYEKREEDMNRTREKLEQYTASLGEIREKITEIREQWEPQLDVLIS
KISNAFAYNFQQIGCAGEVAVFKDEEDFDNWSVQISVRFRENEPLSVLNSHRQSGGERAV
STIFYLMALQDLAQSPFRVVDEINQGMDPRNERMVHERMVDIACQERTSQYFLITPKLLT
GLKFHPKMKVHVINSGEHIPDSKTVKGGWDLNDMAKIALRTRKGITVT
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgcccggtctagtccgaagagggcggaaacgcccatcgctggccgtcagcgagcaagtc
gacaagcagtccgacgacgattcctctacgtcaagcagcaaacgcgcccgccatgaccgg
gacgcgtccggcagtccttccccaagcacgtacatgcaaaacgatgatgcagacggaaca
agcgcatacgttcaagatgaattccagccaggctctcttgttagggtaaagctgaagaac
tttgtcacatacacagctgccgaatttcatctgggccccagtttgaacatggtcattggt
ccaaacgggacaggaaagagtacgcttgtgtgcgcaatatgcctgggtcttggatggggt
agcgaacatctgggaagagccaaggatttgggtgcttttgtcaaacatggtgctagcgaa
gccattgtcgaaatcgagcttgcaacaggcccaggcaatggtccaaatcgtatcgttcaa
cgtacgattcgcaaagaagacaataagtctgtgttctttctcgatggcaagcgcgtttcc
caagtcgctgtaacaaccatggccaagcaattttccatacagattgataacctttgtcaa
ttcttgcctcaagaccgtgtcgtcgagtttgccaaaatgaccgatgtcgaccgcctacga
gagactcagcgtgcagcggcgcccccgcacatggttgagtggcatgacgaactcaaggcc
ctgcgtattgaagaacgcaatgtccagacaaaagaaaccaacgagcgcagtcatttggaa
aagttggaaaaacagcagaatgcaaccagagaggatgtcgaacgattccatcaacgcgag
ggcttgttgcgcaaatcgaaatgtctgaagaaggtcaggcccatgattgagatcaagctg
ctcaaaaacgacatattgaaaatgaaggaagacaggaggctggcaatgctagagctggat
cagatcaaggaagacatggaaccagcgcgtatagccttgtcagaagtggaaacatatcgt
aatcagattgagcaagttgtgaagctccgcaagaaccgtgtcgatttgattaagacacaa
gccgacaagctcgtgaaagatatcgatacagagaaggcaaaggccagcgactccacggag
ttgatcaaggtcgagctgagagccaaaaaatcgcgtgagcaggatattgtccgcattacg
gcagatatcaataggctagaacaaaaacgacagaacacggctgtggaatacgatgctgca
tcttttgaaagtcgcaaggcagaagttcgaggtcaaatttctaccatcagcaacagcgta
acggataagcaaaattcgatatcgggtcttcgcgaacgcgcgcatgcaattgcggacgag
aacacaaagctgaacacacagcgagagcagttgaacacgcaaagcggcaagcaggcaagc
cttctacagagactttcacccgacactgcgaaagcttggaaatggattcaggaaaacaag
cacactctgaatttcaagggtgaagtctttggtccgccaatcttggaatgttccattcca
gataccagatatgctcaagctctagaaggccagctgagaaaaggcgatgtcattgcaatc
acttgtactcatagcgatgatcagcagttactgtcgaacctcctccttagaaaggtagcc
aatgggggccaaggactgcacgaagtccatcttcggtcgtcccccaagtctctcgattca
taccaatcaccaatcatgaaagaggacttggagaaatttggctttcagggctacatgctc
gacttcattcaagggcccgccgctgttttggccatgctttgcgacaacaaccgcctacat
cagatagcttattcaccgaccccaatatcagatgagcagcacgctgctgtatcaaacagc
cctatccgcagctgggtcagtggtactgagacctttcgcatcgtcacgcgcagagagtac
aacgcttcctcaacatctgtcacgaaacttaggcctgctcaatggtttacggaccaacca
actaacacagaagaggttcgggcgatcgaatcgagaattacagagctagtgcaagagaaa
gaagagatccaggaaaattacgccattgttacaaacgaaatgaagagtctcaaacaagaa
ctcgaggagctcaagcaggcgagggaagcaatacaagcagagcaagatgctacgaaaaaa
gctctggcagagtggcgggccattcctgataagatcgcttccaaacaggcccaattggac
gaccacaagcagcaaaatacagaaaccaatgagcgcatccgtgaaattaaaacacaggct
cgtgaaacatcattacgcgtagcggcacaagctctagattatgctaaagctgtgacgcat
atgcgtacatttcatgaatcgctcattgaagctgaaattcggttcatcgaagccaagtcg
gaactcaatgcattgagaaatgaaaacagtgcaatgatccagaggcagcagacaaaagaa
actgaggttcaagaacttggcaatcgcatcaaacgtcttcgcgaggagtaccaaaagaag
acagcagctactcaacaagacattgaaaccttgaccgaagaggagaagcagatcgttttg
gagtatcgcgaactcccttcatttgacgatctcgagcaggaagttcaagccgtcgctgca
cgattggagatgatggctgaaggcaatcccggtgctattagagcttacgagaagcgcgag
gaggacatgaacagaacgcgagagaagctggagcagtacacggctagcctcggtgagatc
agggaaaagattacagagattcgcgaacaatgggagccacagctcgatgttctcatcagc
aagataagtaatgcctttgcatacaacttccagcagattgggtgtgctggcgaggtcgct
gtgttcaaggatgaggaggactttgataactggtctgttcagatctcagtccgcttccgt
gaaaacgagccccttagtgttctcaattctcatcgccaatccggtggcgagcgcgccgtc
tcaactattttctaccttatggctcttcaggatctcgcccagtcgcctttccgtgtcgtc
gacgagatcaatcaaggtatggatccgcgcaatgaacgaatggtgcatgagcgcatggta
gacattgcctgccaagagcgtacaagccaatatttccttatcactccaaaactcttgact
ggcctcaagttccatcccaagatgaaggttcacgtcatcaattctggagaacatatcccc
gactcaaagactgtaaaagggggttgggatctgaacgatatggccaaaatcgcgctgagg
acaaggaagggtattacggttacttga
DBGET
integrated database retrieval system
