Bipolaris oryzae: COCMIDRAFT_35254
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Entry
COCMIDRAFT_35254 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
bor
Bipolaris oryzae
Pathway
bor03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
COCMIDRAFT_35254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bor03036
]
COCMIDRAFT_35254
Chromosome and associated proteins [BR:
bor03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
COCMIDRAFT_35254
INO80 complex (yeast)
COCMIDRAFT_35254
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
TPT
HDA2-3
EamA
HAT1_C
Motif
Other DBs
NCBI-GeneID:
19122739
NCBI-ProteinID:
XP_007686256
JGI:
Cocmi1_35254
UniProt:
W6Z6B5
LinkDB
All DBs
Position
Unknown
AA seq
1963 aa
AA seq
DB search
MPPGHQGEPTPSAYHRSPTQAGQPYHHHSPNTPAPLPLQPHQHHRQPASPSSTELPPIST
ALYSRDTSRYYDPTSDNGDNRVARDPARYEPQYPAQQPRDPHAYHDPRPAHSPYEKVYHS
PVAASYPQHSPLRRPHSQHQHTGGMETMSHSPVSPSVYQSMNRPGGAVQPPTYDRRPSFK
DEAPPPTRADPMSLSSIMSSGADNEPPSKPQPPAPVTADPFRPSKPLPNQHFVKQEAVAS
PAPADLPLHENGYTPRPTHDAIAVSGSVQPALQSATRELPPPDEADVEAQLAHIETTQMG
DMDILISSREEAEYKQRSQKRILEVSATEASKRKRRRTATLIRFQDVSAAHRDYAKHSYN
VEHEGDAWQQVQSQEIAEEKERKKDMQRKRRREKTIQNEEAKRAEALAKAGQAENEEEKE
RHLLAAQKAERKAKTTTQLLQGNAPSKDIREVTPHGPNMEGGTMSSFQASDDAPSGKRKG
GRGNGRLKKSKEQKQAEKDAAAAGQAALDRGDDLPMIAPREEARLDSIRGRSYTEDIGPV
VLTSYDSPVYRNLYHQIVKDLARKDVPKVVRIKENSLSTKQSNLRKTAQLAAKEARRWQM
RTNKNQKDTQARAKRGMREMLAFWKRNERDERESRKNAERQELENAKKAEADREANRQKR
KLNFLISQTELYSHFIGKKARTDEIERSTDDADTAAAAPPQQRPAQPGIEVGDMPTGAAA
KVTNFEDLDFDNEDESALNAAAMANAQHAIQEAQDRARAFNKSGDDEEDGELNFQNPSGL
QNKEDWIPQPNLLSCTLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTVQSISVMAYLA
ERYNIWGPFLVIAPASTLHNWQQEIAKFVPDLNVIPYWGTAKDRKILRKLWDRKHVTYTR
DSPFHVVVSSYQLVVQDAQYFQKMRWQYMILDEAQAIKSSQSSRWKSLLGFHSRNRLLLT
GTPIQNNMQELWALLHFIMPSLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLRRLHMILK
PFMLRRVKKHVQKELGDKIELDVYCDLTYRQRAYYANLRAKINIMDLVEKAVGDEQDSAT
LMNLVMQFRKVCNHPDLFERAETWSPFSFASFAETASFLREGQNVRVGYSTRNLIEYSLP
RLVGREGGRLDLAGPDNQKAGFKGHYLDNLMNIWSPDNIEASARQSGAFSWLRFSDLSAS
EASQVAKSGLFQRALVAEKKPSKVSRFNICYDGDAGKWEPKHSIFNIVDRQDRVPLAEVA
TEGHMHNLFNIAQSAFEKTGLNVIEPCAKPKASAPPIELYCASQGVITEKQNIFFNPVIR
TALYGISDLTEQAILETKSESTALTVHNKLPPPTNQRTRFTHIEAPSMSRFVTDSGKLAR
LDALLKELKANDHRVLLYFQMTRMMDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQS
DRSIFVFLLSTRAGGLGINLTSADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLI
TRGTIEERIRKRALQKEEVQRVVISGGGGAGVDFNTRSRENRTKDMAMWLVDDDQAAEIE
KKEAELAEQEKNAPPGKKRGKKKQRAETNLDDMYHEGEGHFDESAKASGAATPIASSEAP
VGGKLEKRPSIEGLVDNIDPRESHELEELPTFEKPVTEPTPISLKDKLITCFWIALNTLS
TLGLIFLSKRVFSDKQLKACQLMVVMWHFTATGLVLFISTLRPFYAFKAVKLNIWQMLPV
CGFFAGYVVLGNLSLTFNSIGFYQLSKVMTTPTVVLINFVLFRKYVTRYMLAAILATCIG
VSFTINEAAKTQLFGVIIATLAFCSTALYQIWIGKKIEDFAVSPPQLLLNQAPISVCLLL
PFVPFFDTVPDLSTVPTDILWSVCASGIMASMYNLSQFLIIGRTSALTFNIVSHLKTILI
LSIGWYSEGKILSGREWFGVLLALGGGWVYSHLALKAKKQGGK
NT seq
5892 nt
NT seq
+upstream
nt +downstream
nt
atgccgccagggcaccaaggggaacctacgccatcagcttaccacagatcgcccacacaa
gcaggccaaccataccaccaccactcgccaaacacgcctgcgcccttgcctctgcaaccc
catcaacaccaccgccagcctgcatcgccatcctcgaccgagctgccgcccatcagcacg
gccctctattctcgcgacacgtctagatattacgacccgacctcggacaatggcgacaac
cgcgtagccagagacccggcgcgttacgaaccccagtatcctgcacagcagccccgggac
cctcacgcctaccacgaccctcgacccgcccacagcccctacgagaaggtctatcactcg
cccgtcgccgcttcatacccccagcactcgcccttgcggcggccccattcgcagcaccag
cacaccggcggcatggagaccatgtcacactctcccgtctcgccatcagtttatcaatcc
atgaaccggccgggcggtgccgtccagccgccgacctacgatagacggccgtccttcaag
gatgaggctccaccaccaacacgcgccgaccccatgtcgctctcaagcataatgtcttct
ggcgccgataacgagcccccgtccaaacctcagccaccggctcccgtcaccgccgaccca
ttccgaccatcaaagcccctgcccaaccagcactttgtcaagcaagaggccgtggcatcc
ccggcgccagctgacctgcctctgcatgagaacggctataccccacggccgacgcacgat
gccatcgctgtatctgggagcgtgcagcctgcactgcaatctgccactcgcgaactgcca
cctcctgacgaagccgatgttgaggctcagcttgcacacatcgagaccacgcagatggga
gacatggacatcctgattagctcgcgcgaagaggcagaatacaagcaacggagccaaaag
cgtatcctagaggtttccgctacagaggcgagcaagcgcaagcgaaggcggacagcaact
ttgatccgtttccaggatgtgtcggctgcacaccgcgactacgccaagcactcttacaac
gtggagcatgagggcgacgcatggcagcaggtgcagagccaggagattgccgaagagaag
gagcgcaagaaggacatgcaacgcaaacgaagacgggaaaagactatccagaacgaagag
gctaagcgtgctgaagctctcgcaaaggctggccaagctgaaaatgaagaggagaaggaa
cgacacttgctagctgcccaaaaagctgaacgcaaggccaagactaccactcagcttttg
caaggcaatgctcctagcaaagacatccgcgaggttaccccacatggccccaacatggag
ggaggcacgatgagttcgttccaggcctctgacgacgccccgagcggaaagcgcaagggc
ggccgtggtaacggccgtctcaagaagagcaaggagcaaaagcaggcagaaaaggatgcc
gcagccgcaggccaagctgctctcgaccgtggcgacgaccttcccatgattgctccgcgc
gaggaggctcgtcttgactcgatacgaggccgcagctacaccgaagacatcggccctgtc
gtgctcacttcctacgactcgcccgtatatcgcaatctgtaccaccagatcgtcaaggac
ttggcccgcaaagatgttcccaaggttgtccgcatcaaggagaactcgctgtctaccaaa
cagtccaatcttcgcaagactgcccagttggccgccaaagaagcacgtagatggcagatg
cgcaccaacaagaaccagaaggatacgcaggctagggcgaagcgaggcatgcgtgagatg
cttgcgttctggaagaggaacgagcgtgacgaacgtgaatcgcgaaagaatgcagagcgt
caagagttggagaacgcaaagaaggccgaagctgatcgtgaagccaaccgacagaagcgg
aagctcaactttcttatctcgcagaccgaactctactcgcatttcatcggaaagaaggcc
agaacagacgagattgagaggtctactgatgacgccgataccgccgcagcagcgccacca
caacaacgaccagctcagcctggtatcgaggtcggggatatgcccacaggggcagctgct
aaagtcaccaactttgaggatctggacttcgataatgaggatgagagcgccctcaacgct
gctgccatggcgaacgctcaacacgctatccaagaagcacaagaccgtgcccgtgccttc
aacaagtctggtgacgatgaagaggatggagaattgaacttccaaaacccatctggtctt
cagaacaaggaagactggattcctcagccaaatctactcagctgtactctcaaggagtac
caactcaagggtctgaactggctagtcaacctgtacgaacaaggtatcaacggtattctg
gccgacgaaatgggtctcggaaagacagtccagtcgatatccgtcatggcatatcttgcg
gagaggtacaatatctggggacctttccttgtcatcgctcctgcgtcaacattgcataat
tggcagcaggaaatcgcaaagtttgttccagatctcaacgtcattccatactggggtacg
gccaaggaccgaaagattctgcgtaagctctgggaccgcaagcacgttacctacacccgc
gattcgcccttccacgtcgttgtctcctcatatcaattggttgtccaggatgctcagtat
ttccagaagatgcgctggcagtacatgatccttgacgaggcccaggctatcaagtcatcg
cagagttccagatggaagagcttgctcggattccactcacgtaaccgactgctactgaca
ggtacccctatccagaacaacatgcaagaactttgggcacttctccatttcattatgcca
agtttgttcgattctcacgacgagttcagcgagtggttttccaaggatatcgagagtcac
gcacagagtaataccaaactcaatgaggaccagctgaggcgtctgcacatgatcctgaag
ccgttcatgttgcgtcgtgtcaagaagcatgtgcagaaagagcttggagacaagattgaa
cttgatgtctactgcgacctgacatatcgccagcgtgcctactacgccaatctacgcgcc
aagatcaacattatggacctggttgaaaaggcagttggagacgagcaggacagtgccact
ttgatgaacctggtcatgcaatttaggaaagtctgtaaccaccccgacttgttcgagaga
gcagagacctggtctcccttttcctttgcttcctttgctgagacggcgtcgttcctccga
gagggtcagaacgtaagagttggttactcgactcgcaacctgatcgagtattctctgccg
cgtcttgtgggccgcgaaggaggtcgcctggatcttgcaggacctgacaaccaaaaggcc
ggattcaagggacactatctcgacaacctaatgaacatctggagtccggacaacattgag
gcatcggctcggcaaagtggcgccttctcctggctccgcttctccgacttgtctgcaagc
gaagcctcccaggttgccaagagtggtcttttccagcgagctctcgttgcagagaaaaaa
ccgagcaaggtcagccgcttcaatatctgctacgatggtgatgctggcaaatgggaacca
aagcactcaatattcaacattgtcgatcgccaggatcgtgtgccgctggctgaggtagcc
accgaagggcacatgcacaacctgttcaacattgctcaatctgcgtttgaaaagacgggc
ttgaacgtgattgagccttgtgcaaagcccaaggcatctgcacctccaatcgagctatac
tgtgccagccaaggagttattactgaaaagcaaaacatcttcttcaatcctgtcattcgc
accgcattgtacggcatctcggacttgactgagcaagcaatactggagaccaagtcggag
agtactgctttgacagttcacaacaagcttccgccaccaaccaaccagcgtacccgtttc
actcacattgaggcaccatcaatgtcgcgcttcgtcacggactctggcaagctagctcgc
ctagatgcactgctgaaggaactcaaggccaatgaccatcgcgtcctcctgtacttccag
atgaccaggatgatggatctcatggaagagtacttgacctacaggaattacaagtactgc
cgtctagacggatctaccaagctggaagatcgtcgtgacactgtggcggatttccagagc
gatcgatccatcttcgtgttcctactgtctactcgcgctggtggtcttggtatcaacttg
acttcggctgacactgtcatcttctacgactcggactggaatcctacgattgattcgcaa
gccatggaccgtgctcatcgtctcggtcaaacacgacaagtcactgtgtatcgtctcatc
acccgtggtaccattgaggagcgtattcgaaagcgtgctctgcaaaaggaagaggttcag
cgcgttgtcatctccggaggcggcggcgcaggagtcgacttcaacactcgttcccgagaa
aacaggaccaaggatatggccatgtggctcgtggacgacgaccaagccgccgagattgag
aagaaggaggctgaactggcggagcaggagaagaatgctccaccgggcaagaagcgtggc
aagaagaagcagagagctgaaacgaacctcgatgacatgtaccacgaaggtgaaggacac
tttgacgagagcgccaaggcgagcggtgcagcaacgcctattgcatcgagcgaagcgcct
gtagggggcaagctggaaaaacgcccctccatcgagggcctcgttgacaacatcgacccg
cgtgaatcccacgagctcgaggagctgcccacattcgagaagcccgtcacggaacctacg
ccaatatcgctcaaggacaagttgataacatgtttctggatcgcgctcaacacgctctca
acgctgggattgatcttcctgagtaaacgagtattcagcgacaagcagctcaaggcgtgt
caactcatggtcgtcatgtggcatttcaccgccaccggtctcgttctcttcatttcaacg
ctgcggcccttttacgccttcaaggccgtcaaactcaacatctggcagatgctgcccgtc
tgcggtttcttcgccggctatgttgttcttggcaatcttagcttgaccttcaactcgatt
ggcttctaccagctttccaaggtcatgaccacacccacggtcgttctcatcaactttgtc
cttttccgaaagtacgttacgcgatacatgctggctgctattcttgcaacatgcattgga
gtctccttcaccatcaacgaggcggccaagacccaattgtttggtgtgattatcgcaact
ctggctttctgcagtactgccctgtaccaaatctggattggtaagaagattgaggacttc
gctgtatcgccaccccagcttctgctcaaccaggcacccatctcggtctgcctgcttctt
ccctttgtcccatttttcgacactgttcccgatctttcaactgtgcccaccgatatcctc
tggagcgtatgtgcatcgggtatcatggcttccatgtacaacctgagtcagttcttgatt
atcggaaggacgagcgccttgaccttcaacattgtcagccatctcaagactattttgatt
ctgagcataggatggtacagcgaaggaaagattcttagcggaagagaatggttcggtgta
ttgctcgcactcggtggtggatgggtgtactcccaccttgcgctcaaggcaaagaagcag
ggcggaaagtaa
DBGET
integrated database retrieval system
