Bipolaris oryzae: COCMIDRAFT_36290
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Entry
COCMIDRAFT_36290 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K10858
DNA mismatch repair protein PMS2
Organism
bor
Bipolaris oryzae
Pathway
bor03430
Mismatch repair
bor03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
COCMIDRAFT_36290
03460 Fanconi anemia pathway
COCMIDRAFT_36290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bor03400
]
COCMIDRAFT_36290
DNA repair and recombination proteins [BR:
bor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
COCMIDRAFT_36290
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
NOA36
PI3K_1B_p101
Deltaretro_Tax
DUF664
Motif
Other DBs
NCBI-GeneID:
19122988
NCBI-ProteinID:
XP_007687409
JGI:
Cocmi1_36290
UniProt:
W6ZQX0
LinkDB
All DBs
Position
Unknown
AA seq
1085 aa
AA seq
DB search
MATIKAIEGRSVHQIQSGQVIVDLQSVCKELVENSIDAGATAIEVRFKNYGLDTIEVQDN
GSGISPEDYQTIALKHYTSKLATYDDLTSLQTFGFRGEALSSLCALSKFHIVTSRASDGP
KGTRLDFEQSGKLKGTSVVAAKQGTTVVVDTLFHNLPVRRKELEKNIKREYNKVLQLLNA
YACISVGVKFSVSNQIPKGKKTIAFATNANSSTRDNISNVYGAKTVTALIPLNLEFIMDP
SNRPGATQSIKVPDAQEDIASRTVKIVGHISRPVVGEGRQTPDRQMFFVNSRPCNLPQVN
KAFNEVYKSYNITQSPFVFADIKLDTNAYDVNVSPDKRTIMLHDQAVLLENIKDSLLELF
QGHEQSVPQSQLLKNKTPTSAFKLPTIQPRESTTSVQESDQSDPEDSDRDEVAIQESSKR
ALTRDIPDVANRPGFVKASLLERFAGRDSEDRTTHPPHRLSRDSSLHKDKRHPAEITRSR
SQSPLFEPEANMDDVAPGHPQLPRAIQDFNARVASQSPRSVGLTRPSMSDEPDQQGEGAE
QPVPAIKQAPQKPLSQSTIQNAFDRMRPMRTPVQQATITVGDTTTVSTIGTGSHSVASRR
SRIHIPKSSSSANLLGQTPNKSLFKKGLGGFTAPGTQLGSSDEDEDEDEDEDEDEDEDDE
DEDEGHGNTTRVPIRSPSSAKRLPSRALEGPRINNLTTLSRASPDRSVSISDRSSDAEPV
EVVEKESEAAGEGSDDEYEDDTEKKAREEARFTKLIAEAEETAAQPSEMSLKRADKLFTV
SQKKHWTINLRRVIKTNIESIARHAQHIQPSIDASRAEVDQTAILSTDAQSNGEEAEERL
SLTVTKADFGKMRIIGQFNLGFIIAVRPPTSTSPNSHLFIIDQHASDEKYNFERLSATTK
LVSQRLVHPHPLELTAVEEEIILANQPTLTANGFVVELNPTSNTEPSPATRASLTSLPMS
KEVTFTPSDLEELLSLILDNPPSSSTSSSSAYILRPSKVRKLLASRACRSSVMIGKTLKT
QRMREIVRHMGGMDKPWSCPHGRPTMRHLLDLEKWVGWKEGEGVVGVEVKGEKTDWGDYL
RRSGG
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atggccacaatcaaggctatagaaggccgctctgtgcatcagatacagtccggccaggtc
attgtcgaccttcagtctgtctgcaaagagctggtggaaaacagcatcgatgcaggcgcc
acggctatcgaggtgcgcttcaagaactacggcctcgacaccatagaagtccaggataac
ggctctggcatctcaccagaagactaccaaaccattgccctcaagcactacacctccaag
cttgccacctacgacgatctcacgtcgctgcagacatttggcttccgtggtgaggccttg
tcgtcgctatgtgccctctccaaattccacatcgttacaagccgagcctcagatgggcca
aagggcaccaggctcgacttcgagcagtcgggcaagctcaagggaacgtcggtcgtggct
gctaagcagggcaccaccgtcgtggtcgacactctgttccataatctacccgtcaggcga
aaagaactcgaaaagaacatcaagcgtgaatacaacaaggtcctacagctattgaatgca
tatgcgtgcatcagtgttggtgtcaagttttcggtcagcaaccagatacccaaagggaag
aaaacaatagcttttgcaaccaatgcgaactccagcacgcgggacaatatctccaatgtg
tacggtgcaaagacagtgaccgcactcatacccctcaacctcgagttcatcatggacccc
tccaataggccgggcgccacgcaaagtatcaaggtcccggacgcacaagaagacatagca
tcgcggaccgtcaagatagtaggccacatatcccgtccagtcgtgggcgagggtcgtcag
acgccagacagacaaatgttttttgtaaattcgcggccctgcaacctgcctcaggtcaac
aaagcattcaatgaggtctacaagtcctacaacatcacacagtctccttttgtctttgcc
gacatcaaacttgacacaaacgcctatgacgtcaatgtaagcccagacaaacgcaccatc
atgctccatgaccaagcagtgctcctggagaacatcaaagactcattgctcgagttgttc
caggggcatgaacaaagtgtgcctcagtcccagctgctaaaaaataaaacgccgacatct
gcgtttaaacttcccacgatccaacctcgtgaaagcactacatctgtacaagaaagcgac
cagagcgatccagaagactcggatcgcgacgaggtggcaatacaagagagctctaaaaga
gctttgacacgagacatacccgatgtggctaaccgtcccggatttgtgaaagcaagcctt
ctcgaacgattcgctggccgcgactctgaagaccggacgactcacccaccacatagactt
tcaagagacagttcgttgcataaagataagaggcatccagccgagataactcgttcacga
tcgcaatctccattatttgaacctgaggcaaacatggatgatgttgctcctgggcacccg
cagcttcctagggccattcaagatttcaatgcacgtgtggcgtctcagagccctcgctcg
gtgggattaacacgtccatcaatgtctgatgaacctgaccaacaaggtgaaggtgcagaa
cagccagtcccggctataaagcaagctccccagaaaccgttgtcacagagcaccattcag
aatgcttttgatcgtatgcgccccatgcgaacaccggtgcagcaggctacaataaccgtt
ggtgatactacaactgtctctacaattggtactggcagtcattcagtcgcttcaaggcga
tcgaggatacacattccaaagtcttcctcttctgccaatttgttaggtcagacgccaaat
aaaagcctgtttaagaagggtttgggtgggttcaccgcaccgggcacgcagttggggagc
agtgatgaagacgaggatgaagacgaggatgaagatgaggatgaagacgaagacgacgag
gatgaggatgagggtcacggtaacacgactcgtgtaccaatacgctctccctcttctgcc
aaacgcttaccatccagggcgctcgagggaccacgtattaacaacttgactaccttgtcc
cgcgcttctccagatcgctcagtgtcgatttctgacagatcatcggatgctgagcctgtt
gaggttgttgaaaaagaatcagaggcagctggcgagggttcggacgatgagtacgaggat
gataccgagaagaaggccagagaggaagctaggtttactaagctaattgcggaggctgaa
gagactgcggctcagcccagtgagatgagtctaaagcgtgccgataagctctttacggtc
agccaaaagaagcactggactattaacctcagacgcgtcatcaagaccaatattgagtcg
attgcccgtcatgcgcagcacattcaaccctctattgatgcatctcgggcagaagttgat
caaacggcaatactatctactgatgcccagtcaaacggagaagaggcagaagaacgcctc
agtctaacagtcacaaaagctgacttcggaaaaatgcgtatcatcggccaattcaaccta
ggcttcatcatagccgtgcgacccccaacctcaacatcaccaaactctcacctgttcatc
atcgaccagcacgccagcgacgaaaaatacaacttcgaacgcctatccgcaaccaccaaa
ctcgtctcccagcgcctcgtgcacccccaccccctcgaactaaccgccgtagaagaagaa
ataatcctcgcaaaccaacccaccctaaccgccaacggcttcgttgtcgagctcaaccct
acatccaatacggaacccagccctgccacccgcgcaagcctcacctccctccccatgtct
aaagaagtaaccttcaccccctctgaccttgaagaactcttatccctcatcctcgacaac
cccccttcctcctccacctcctcatcttcagcatacatcttgcgcccctccaaagtccgc
aagttactcgctagccgcgcgtgcaggagctcggttatgattggtaagacgctcaagacg
cagcgcatgcgcgagattgtgcggcatatggggggaatggataagccatggtcttgtccg
catggaaggccgacgatgcggcatttgttggatttggagaagtgggtggggtggaaggag
ggggagggggttgtgggagttgaggttaagggagagaagacggattggggggactatctg
aggaggagtggggggtga
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integrated database retrieval system
