Bipolaris oryzae: COCMIDRAFT_3670
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Entry
COCMIDRAFT_3670 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
bor
Bipolaris oryzae
Pathway
bor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
COCMIDRAFT_3670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bor03041
]
COCMIDRAFT_3670
Spliceosome [BR:
bor03041
]
Complex B
Other components
Prp19-related factors
COCMIDRAFT_3670
Complex C
COCMIDRAFT_3670
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
RRM_1
Nup35_RRM_2
RRM_occluded
RRM_YTH1
RRM_3
Motif
Other DBs
NCBI-GeneID:
19123093
NCBI-ProteinID:
XP_007686063
JGI:
Cocmi1_3670
UniProt:
W6ZC91
LinkDB
All DBs
Position
Unknown
AA seq
381 aa
AA seq
DB search
MPPQIKSDLNRSGWETTDFPSVCEKCLPDNPYVQMLKEDYGAECKICTRPFTIFRWKADR
TARQKRTNICLTCARLKNCCQHCMLDLSFGLPIVVRDAALKMVAPGPQSDINRQYYAQEH
EKEIEEGRGAMEAYEKTDEKARDLLKRLAQSEPYYKKQRRLEAEAGESSGQKALPAPGGS
GGAGAGASRESNHIPGPIRTRDSRGPSARGGMRPGRGGRMGGPAAEPSPQDWLPPSDPNV
ASLFVTGVEDDLPEHEIRKHFTQYGQLRSLVCSHRAHCAYVNYAKREDAETAAAALKGKV
VIKGCPMRVTWGKPKQLDSLDQNVRMQYAKEGRQVAGSSRRAAATSQAAIEAGPQSNLDS
MVIAPPPSADDEVQYASLAGN
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgccgccccagatcaagagcgacttgaaccgcagcggctgggagacgactgacttcccg
tccgtctgcgaaaaatgcctgcccgacaacccctatgtgcagatgctcaaggaggactat
ggcgccgagtgcaagatttgcacgcgaccttttaccatcttccgctggaaggccgaccgc
accgcccgacagaagcgcaccaacatttgcctgacatgcgcgcgtctcaagaactgctgc
cagcactgcatgctggatctttcgtttggtctgcccatcgtcgtccgtgatgcggcgctg
aagatggttgcgcctggcccgcagagcgacatcaaccgacaatactacgcgcaggaacac
gagaaggagattgaggagggccggggagccatggaggcctacgaaaagaccgacgaaaag
gcgcgtgatctcttgaagcgcctcgcacagagcgagccatactacaagaagcaacgacgg
ttagaggccgaggcgggcgagagcagcggacaaaaggcgttgcctgcgcccggtggtagt
ggaggtgctggtgcaggtgcgagccgcgagagcaaccacatcccgggacccatcaggacc
agagattctcgcggtccttctgcgcgaggaggtatgcgaccaggacggggaggccgcatg
ggaggcccagccgcagagccgagcccacaagactggctgccaccctctgatcccaatgtt
gcttcgctctttgtcaccggtgtcgaggacgatctgccagaacatgagatccgcaagcac
tttacacaatatggccagctccggtcgctggtttgctcgcaccgagcgcactgtgcatac
gtcaactatgccaagagagaggatgcagaaactgcggcagcagctctgaagggcaaggta
gtcatcaagggttgcccgatgcgtgtcacttggggcaagccgaagcagctggacagcctg
gaccagaatgtcaggatgcaatacgcaaaggaaggacgtcaagtggcgggatcatcgcga
cgtgccgctgccacttctcaagccgccattgaggctggtccacaaagcaacctggacagc
atggtcattgcgccgccgcccagtgctgacgatgaagtccaatatgccagtttggcaggt
aactaa
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