Bipolaris oryzae: COCMIDRAFT_37498
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Entry
COCMIDRAFT_37498 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K11578
protein transport protein DSL1/ZW10
Organism
bor
Bipolaris oryzae
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bor04131
]
COCMIDRAFT_37498
03036 Chromosome and associated proteins [BR:
bor03036
]
COCMIDRAFT_37498
Membrane trafficking [BR:
bor04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
COCMIDRAFT_37498
Chromosome and associated proteins [BR:
bor03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
RZZ complex
COCMIDRAFT_37498
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
WD40_WDHD1_1st
WD40_Prp19
ZW10_C2
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR75_1st
NLE
WD40_Gbeta
EIF3I
Beta-prop_TEP1_C
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_Nup120_160
Dsl1_C
Beta-prop_Aladin
Beta-prop_DCAF12
cas_Cpf1_2nd
MIOS_WD40
WD_LRWD1
Beta-prop_Vps41
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
19123258
NCBI-ProteinID:
XP_007688791
JGI:
Cocmi1_37498
UniProt:
W6Z4N0
LinkDB
All DBs
Position
Unknown
AA seq
1282 aa
AA seq
DB search
MPPQVSDEQLGDALLQSAQYGAFPQDEHVASATVPSTALPKLLEVVTKAREDTKNQVRQL
SREAAPDVDGWITQARKLQHDIKRSQDTAKEIVQLAEAGKENTARVQDAASKVSLLHTEI
AYNESLVQTVEQLRDISSLLDSAQNAAVNGHVLHAISTLEDADGAFKRLGPFTTTRVVGV
LRNKQDQLKKALVETVIDSWNGLISVDSANHKISLHQSIEREAKVDINTTVEALVKLGLL
DNLIVRLSRDLDKVIISPRLDMGADRVVSMFQVHEDDIQRAGPVNDGSIKATIGDIQSIA
EYLSTRLPPSIVIPLSHKIVPIIVSRLISNHLLPAIPLSAEGIPQFQESLSYVLGLVEFL
DELGWSGQSRLTEWVDKSPELWLARQKEAAIAQVQAMIPKKVLEKKAVERVETQIVSKGD
ALHAGDDQEDDWAAEWDGEGEDETTKEQTVSVEEEDMSAWGEEVDIPDEEPKEEVSKEKP
SDVEDAEDWGADWDDETDTKPTATPNPTAKATESPNSKKKSAQQKAPTNQKVTLRETYTV
TAIPDAIMDIILQVLRDVEALNSADLVKSAISPASGGLYAIPSLLLAMYRATAVMHYTKD
VASNMLIYNDCQRLSDRLRLFLQEQAERDTSSTLPQHLRPSKRLKPLLEADIKTIDGFGK
RAYGREMESQRQIIRDHLEDAQGFQDCTNVPFATVCDDAIATTIDRIGDVKRQWQNVLSK
SALLQSLGSLVSAALTKFVNDVEDKADIAEDESRKLHGYCVSLSTLAQHFQTEDDNGEIR
DMAGVYTPNWFKFQYLSEILDSSLADIKYFWTDGELKLEMEAEEVIGLIEALFAPSDHRR
RAIAEIRRTSHAPVALTRHKLSTLVNELLHRGDENRIPFDILINGEFLRTTIDQFLTKNG
INAEATLDVEYTRALVPPLNVTSFEHDDWVSAVDVLSGVQSGQERILSASYDGLLRVWNT
SGDVLAMSEAPNNGGRITSLKTAKWLSEKKMVAAGLDNTVRVYKYDDDARTITTALELFN
HRWGVEDVAVHAPSNRILSASSDTTVSLFSSNAKENPIAPSNLLPNSTAASNKRQKLSKP
DRTVPARGALATFTGHSSPVSSVIFKPDDATVAYSASHDHTLKTWDLPTATCVDTRTTGH
SLLSLCAIPSRNLLATGTSARHITLVDPRASATQISVMTLRGHKNAVVSLDTDPSSEHNL
VSASHDGTVQIWDLRNVSAGGQVGEGLTGESVYTIYRQSRDGENVKSHGEGAKVFSVCWD
RQVGIVSGAEDKRVQINRAIGS
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atgcctccgcaagtgtcagacgagcagctaggcgatgcgctccttcaatcggcacagtat
ggagcgttcccccaggacgaacatgtggcatctgctacagtgccatccactgcactccca
aaactgctagaagtagttaccaaggcccgcgaagacaccaaaaatcaagtccgtcaactc
tcacgagaggctgcgcctgacgtcgacggttggattacccaggcacgcaagctccagcat
gatatcaaacgctcccaggatacggccaaggaaattgtacagctagcagaagcaggcaaa
gagaacacggcacgagtgcaggatgctgcaagcaaggtcagcctgttgcacaccgagatt
gcgtataacgagagcctggtacaaacggtggaacaactccgagatatatcaagtttgcta
gactcggctcagaatgcggcggtaaacggtcatgttctccacgccatcagcaccctggaa
gatgcagacggcgccttcaagagacttggtcccttcacgacaacaagagtagtaggcgtg
ctcagaaacaagcaagaccagctgaagaaggccctcgtagagactgtcatagactcttgg
aacggactgatatcagttgacagtgccaaccataagatctcactgcaccagtcgatcgaa
cgagaagccaaagttgatatcaatacaaccgtcgaagccctcgtaaagcttggcctcctt
gacaatctcatcgtccgcttgagtcgtgacctcgataaagtcataatttctccccgtctt
gacatgggtgccgaccgcgttgtatccatgttccaggttcatgaggatgatatacaacgc
gcaggtccagtcaacgatggaagcatcaaggccacaataggagacatccaatcgattgca
gagtacctaagtacacgattaccaccctctattgtcattccactgtcacacaagattgtt
ccaatcatcgtgtcccgtctaatatcgaatcatcttttgcctgccataccgctttcagca
gagggcatccctcaatttcaagagtcgctctcttatgtcttagggcttgtggaatttctg
gatgagctggggtggtctggtcagagccgtctgacagaatgggtcgacaagtcccccgaa
ctttggttggccaggcagaaagaagccgccatcgctcaagtccaagccatgattccaaag
aaggtgctagagaaaaaggccgtggagagggttgagacacagatcgtatccaagggagat
gccttacatgctggtgatgaccaggaagacgactgggcagcagaatgggatggtgagggt
gaggatgagacgactaaggagcaaacagtgtcggtagaagaagaagacatgagtgcgtgg
ggtgaggaagttgatatacctgatgaggagcccaaggaagaagtatctaaggagaagccc
tccgatgttgaagatgccgaagattggggtgcagattgggacgacgaaaccgacacaaag
ccaactgccacgccgaatcccacagccaaagcaacagaatcaccaaattcgaaaaagaaa
tcagcccagcaaaaggcgccgacgaaccagaaggtcacactgagagaaacatacaccgtg
acagcaattcctgatgcgatcatggacatcattttgcaggttctcagagatgtagaggct
ctcaattcggctgatctcgtcaaatcagccatttcacctgcaagtggaggcttgtacgca
ataccaagtctactacttgcaatgtaccgagccactgccgttatgcattacaccaaggac
gttgcgagtaacatgctcatctacaatgattgtcaacgattatccgatcggctgcggctc
ttcttacaagaacaagcggaaagggacacatcatctactttaccgcaacatcttcggccc
tcaaaacgcttaaagccattgttagaggctgacatcaaaaccattgatggattcggcaaa
cgtgcgtacggccgcgagatggaatcgcaacgacaaataataagggaccacttggaggat
gcccaaggctttcaggattgcaccaatgttcctttcgccacagtatgtgacgatgctatt
gccacaaccattgacaggataggagacgtgaagcgtcaatggcaaaacgtcctctcaaag
agcgctttactccagtcccttggctcattagtatcggcggcccttacaaagtttgtgaat
gacgtagaggacaaagcagatattgctgaagacgagtctcgaaaactacatgggtactgt
gtctcgctttctacactcgcacaacacttccagacagaggacgataatggagaaatcaga
gacatggctggcgtatatacacctaactggttcaagttccagtatctcagcgagattctg
gacagcagcctcgcagatatcaagtacttctggacagacggagaactgaaactagaaatg
gaggccgaggaggtgataggcttgattgaggcgttgttcgcaccaagtgatcatcggagg
agagcaattgctgagatcaggaggaccagtcatgcgcctgtagccttaacacgccacaag
ctttcgactcttgtaaacgagctcttacatcgcggggatgaaaatcgcattccgttcgat
atcctcatcaatggcgaattcctccgcacaaccatcgaccagtttctcaccaagaatggt
attaatgccgaagcaacgctcgatgtagaatacactagggcgctggtaccgccactgaat
gtgacgagtttcgaacatgacgattgggtttctgcagttgatgttttatcgggagtacag
agtggacaagagaggatactgagcgcaagttacgacggtcttctgagagtatggaacaca
tcaggcgacgttttggcgatgtccgaggcgcccaacaatggaggtcgaatcactagcttg
aagacggcaaagtggttgtctgagaagaagatggtggccgctggcttggacaacactgtt
cgtgtgtacaaatacgacgacgatgcgcggaccatcacgactgccttggaactgttcaac
caccgctggggcgtagaagatgttgcagtccacgcaccttcaaaccggatcctgtccgca
tcttcagacacgacagtttcgcttttctcgagcaacgcaaaggaaaacccaatcgcacca
tcaaacctgctcccgaactcaacagccgcttccaacaagcgccaaaaactctcgaaacca
gatcgtacggtccctgcccgtggcgcattggcaacattcaccggtcacagttctcctgtc
tctagcgtaatcttcaagccagacgacgccacagtcgcatactctgcttcgcacgaccac
acgctcaagacatgggatctgcccaccgctacatgcgttgacacgcgaacaacaggccac
tcgctcctctctttgtgcgccattccttcgcgaaatctcctcgcaaccggtacctcggca
cgccacattactctcgttgacccccgcgcttcggctacccagatcagcgtcatgacgctg
cgaggccacaagaacgccgttgtatccctcgacacggatccgtcgtctgagcacaatctc
gtgtctgcgtctcacgacggtacggtccagatttgggatcttaggaacgtcagcgcgggt
ggccaggtcggcgagggcttgacgggcgaaagcgtatatacgatttacaggcaatcgcgg
gatggcgagaatgtcaagagtcatggtgagggcgcaaaggtcttcagcgtgtgctgggat
cgccaggtgggcattgtatctggtgctgaggacaagcgggtacagattaaccgtgcgatt
gggtcttga
DBGET
integrated database retrieval system