Bipolaris oryzae: COCMIDRAFT_38302
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Entry
COCMIDRAFT_38302 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K08739
DNA mismatch repair protein MLH3
Organism
bor
Bipolaris oryzae
Pathway
bor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
COCMIDRAFT_38302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bor03400
]
COCMIDRAFT_38302
DNA repair and recombination proteins [BR:
bor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
COCMIDRAFT_38302
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HATPase_c_3
MutL_C
HATPase_c
Motif
Other DBs
NCBI-GeneID:
19123441
NCBI-ProteinID:
XP_007689688
JGI:
Cocmi1_38302
UniProt:
W6ZJK9
LinkDB
All DBs
Position
Unknown
AA seq
982 aa
AA seq
DB search
MPDASDQTILPLPDDVVAQIKSSAAIVSLAGVVLELVKNSLDAKATRVEATVDFVRGGCI
VEDDGLGISPLEFSDKGRLGKLYCTSKYHAKEPLLGRNGTFLAALAAMSFLAIASHHHEY
RSQNAVIFHHARVVERQLPASAHHEVHGRHGTRVTVRNLFGNMPVRVKQRAVMAAQKDEY
EKMCEGLKHDIAGLLLGWQGTVSVRIRDGDNKPILNLNTSARTDQNIGKARSAQLSSLLN
ILTQANYIGIDEWSSWVPASASTSTVSVRGAISLEPAPSKHVQFISLSIRPLSSDSGHNE
LFDHVNRLFALSSFGTVEEEAVVDVYEKMRRQSDKRFKKDGYTNRQLKIRKDIDRYPMFH
LRISLTETDGMAMSEDQVMGNEANLQSIMDVLEAMITQWLVVHHFRPRQSRKRRDAPDTA
SILSSETAASGSSTVTRSASPGQLSVPKNNSACTGTRKRKRSKDSNSHEHSKKHRQAFAT
WSRIKSGKSEFFDTLPARPKLGNQNSVDQNSRAAIQSPNGNEPFASFAMKPIAQGAFGAP
TAQNVLSSMNKISSAEEKENDDSILWTDPSTGNTHVLNARTGCVMPNVQPRPNTDPSTNS
FKSDQKFINKSIRLPSRASTATAKPTPWLDNVLQNWENPVFKPSEQRIQQITNNQDKLSH
HHNQPMHSCSHLTDTSFDTNTTSISSKLSKPGLQTAQVISQVDKKFILVKMQPAYQSSNI
LVLIDQHAVDERIQVESLFQQLCTSSPHVYSSSQLGHKPAVSSLTLEKALSFTVSQQEQS
LFTTHAARFAAWGILYDTSSPPLSSSSNQASLDTRKKNKGKSEALLLVTALPPVIVQRCV
TDPKVLISMLRSTVWGYAEGRIPLPLPPPGTPSIPEDDDWTKENKAWVRALSTCPPALVN
LLNSRACRSAIMFNDELSLVECRELVGKLAQCVFPFMCAHGRPSMVPLVGLGERDGERVA
CALGDHSGSGKSFVQAWKDWKR
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgccggacgcctcagatcaaaccatattgcccctgcccgacgatgtcgttgctcagatc
aagtcttctgccgccatcgtgtcgttggcgggcgttgtgctagaacttgtcaagaactcg
ctggatgcaaaagctaccagggttgaagctactgttgactttgttcgtgggggttgcatc
gttgaggacgacggactcggcatctcgccccttgaattttcggacaaagggcggctagga
aaactatactgtacgtccaaataccatgcaaaggagcctctacttggccgaaatggcacc
tttctcgccgcactcgctgccatgtccttcttggccattgcctcacatcatcatgagtat
cggtcgcagaacgcggtcattttccaccacgctagggttgtcgagcggcagttaccggcg
tcagcccatcatgaggtgcatggcagacatggcacccgtgtcactgtgcgaaacctattc
ggaaatatgccagtacgggtgaaacagcgggcggtgatggcggcccagaaagatgaatat
gagaagatgtgcgaagggctgaaacatgacatcgcaggcctgctccttggttggcaaggc
actgtatccgtgcgtattcgagacggcgacaacaaacccattctcaacctcaacacgtct
gctagaacagaccaaaacataggaaaggcccgttcggcacagctgagttccctcctcaac
atcctgacccaagccaactacattggcattgatgagtggtcatcttgggtgccagcgtca
gcctcgacctctaccgtctctgtcaggggcgccatatcccttgagccagcccccagcaag
catgtgcaattcatttctctcagcatacggccgctttcgtctgattctggacataatgag
ttattcgatcatgtgaatcgtctttttgcactctccagttttggcactgtagaagaagaa
gcagttgtcgatgtatatgagaagatgcggcggcagtcagataagcgcttcaagaaagat
ggctacactaaccgacagctcaagattcgcaaggatattgatcgataccccatgttccat
ctccgtatttcgttgacagaaactgatggaatggccatgtctgaagatcaggtcatggga
aatgaagcgaacctgcagagtatcatggatgttttggaggcaatgataacacaatggctg
gtcgttcaccattttcgaccccgtcaatctcgaaagagacgggatgcgcctgacacagct
tctattttgtcgagcgagactgctgcaagcggctcatcaacagttacaagatctgcttct
ccagggcagttatcggtgcccaagaacaattctgcatgcacagggactcgaaagagaaag
cgctcgaaagattcgaactcacatgagcactctaaaaaacatcgtcaagcttttgcgaca
tggtcgcgtatcaaaagcggaaagtccgaattcttcgataccctacccgccaggcccaag
ctaggaaaccaaaacagtgtcgatcagaattctcgcgcagctattcagagccctaatgga
aatgaacctttcgcctctttcgccatgaagcctattgcccaaggcgcattcggcgcaccc
acggcacaaaacgtgctttcttctatgaacaaaatctcaagtgctgaagaaaaggagaat
gatgacagtatactatggacggatccttcaactggaaacacgcatgttttgaatgctagg
acaggttgcgtgatgccaaatgttcaaccgcgaccgaacacagacccttctacaaattca
ttcaagtctgatcaaaagttcataaacaaatcaattcgtctgccaagccgagcctcaaca
gccacagcaaaacccacgccctggctggacaatgtactccagaactgggaaaaccccgtc
ttcaagcctagcgaacagcgtatccagcaaatcacaaacaaccaagacaaactcagccat
catcacaaccagcccatgcacagctgctcccatctcaccgacacatcctttgacacaaac
accaccagcatctctagcaaactctccaagccaggccttcaaaccgcccaagtgatctct
caagtcgacaagaaattcatcctcgtgaaaatgcaacccgcataccaaagcagcaacatc
ctcgtcctcatcgaccaacacgccgtcgacgaacgcatccaagtcgaatccctcttccag
caactctgcacttcctcccctcacgtctactcctcctcgcaactcggccacaaaccagcc
gtctcatccctgaccctcgagaaagcccttagtttcaccgtgtcacagcaagaacaatct
cttttcacaacgcatgctgcgcgtttcgctgcttggggtattttgtacgatacatcatca
ccgccgctatcgtcatcgtcaaaccaagcgtctcttgacacgcggaagaagaataaggga
aaaagtgaagcattactgctggttactgcgctcccacctgtaattgttcagcgatgtgtg
acggatcctaaggttttgatttcaatgcttcgatcgacggtttgggggtacgccgaggga
cgtattcctcttcctcttcctcctcctggtaccccttctatcccagaagatgatgattgg
acaaaagagaacaaggcttgggttcgtgccttgtcgacttgcccccctgcccttgtcaat
ctactcaattctcgcgcatgtcgctcggcaatcatgtttaatgatgagttgagtcttgta
gagtgtagggagttggttgggaaactggcacagtgtgtgtttccctttatgtgtgctcat
ggtaggccgagtatggtaccgcttgtgggcctgggtgagcgagatggagagagagtagca
tgtgcattgggggatcacagtgggagcggaaagagctttgtgcaggcttggaaggattgg
aagaggtag
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