Bipolaris oryzae: COCMIDRAFT_39203
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Entry
COCMIDRAFT_39203 CDS
T03125
Name
(RefSeq) glycoside hydrolase family 28 protein
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
bor
Bipolaris oryzae
Pathway
bor00040
Pentose and glucuronate interconversions
bor01100
Metabolic pathways
Module
bor_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
COCMIDRAFT_39203
Enzymes [BR:
bor01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
COCMIDRAFT_39203
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Paralog
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Motif
Pfam:
Glyco_hydro_28
LIF-R_Ig-like
Motif
Other DBs
NCBI-GeneID:
19123634
NCBI-ProteinID:
XP_007690693
JGI:
Cocmi1_39203
UniProt:
W6YYZ3
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MRVTDIISCALLQASIALSTPVEELGTEAVAAKHPSVPSRPGKASLVPGSRNKTCTLKAL
GGGKDDSANILSAVKECNNGGHVVFPKNQQFTIGTALDLTFLNGIDLDIQGTIQFTNDTD
YWQANSFKQVFQNATTFFQLGGKDINVYGGGTLDGNGQAWYDLYAKDIYILRPILFGLIG
AKNTRISDLKFRYSPQWYTLVANSSEVVFSNIDIFGDSTSKNPAKNTDGWDTYRSDNIII
QNSNINNGDDCVSFKPNSTNILVQNLVCNGSHGISVGSLGQYPGEVDIVENILVRNISMS
NASDGARIKVWPGASSALSGDLQGGGGSGAVRNVTYDGMIVKNVDYAIEITQCYGQKNLT
LCNQFPSNLTISDITIKNFKGTTSKKYDPRVGYVVCSSPKVCSDISIENIDVKSPSGTNL
FTCTNIEGIQSQVNCTVEGDKGGHS
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtcaccgacatcatctcgtgcgccctgctacaagcgtcgatagcattatcgact
ccagttgaagaacttggaacagaggctgttgcggcaaaacacccgtccgtgccgtctcgc
ccgggaaaggcatccttggtgccgggttcccgaaacaagacctgcacgctcaaggctctc
ggtggcggcaaggatgactctgcgaatattctcagcgctgttaaggaatgcaacaatgga
ggtcatgttgtctttcccaagaaccagcagttcaccattggcactgctttggatcttacg
ttcctcaatggcattgacctagatatccaaggaaccatccaattcacaaacgacactgat
tactggcaggccaattccttcaagcaggttttccagaatgcaaccaccttcttccagctt
ggaggcaaggacatcaatgtctacggtggcggtaccctagacggcaacggccaagcctgg
tacgacctctacgccaaagacatttacatcctacgacccattctctttggcctgatcggc
gccaaaaacactaggatctctgatctcaagttccgctacagcccacagtggtacactctg
gtcgccaactcgagcgaagttgtcttctccaacattgacattttcggcgacagcacaagc
aagaatcccgccaagaacactgatggctgggacacctaccgctccgacaacatcatcatc
caaaactccaacatcaacaacggcgacgactgcgtctccttcaagccaaacagcacaaac
atcctcgtgcagaacctcgtttgcaacggcagccacggcatcagcgtcggctccctcggc
cagtaccccggcgaagtcgatattgtcgaaaacatcctcgtgcgcaacatctccatgtcc
aacgcctcagacggcgcacgcatcaaagtctggcccggcgcctcttccgcgctctccggc
gacctgcaaggcggcggcggcagcggcgccgtacgcaatgtcacgtacgacggcatgatt
gtcaagaacgtcgattacgcgattgaaatcacgcagtgttatggacaaaagaatttgacc
ttgtgcaatcagttcccctccaacctcacaatctccgacatcaccatcaaaaacttcaag
ggcacaacgagcaagaaatacgatccccgcgtcggctacgtcgtctgctccagccccaag
gtatgcagcgatatctcgattgagaatatcgacgtcaagagtccgagtggcacaaatctt
ttcacctgtacgaatatcgaggggatccagagtcaggtaaattgtaccgtggaaggggac
aagggtggtcactcgtaa
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