Bipolaris oryzae: COCMIDRAFT_39393
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Entry
COCMIDRAFT_39393 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K14763
H/ACA ribonucleoprotein complex non-core subunit NAF1
Organism
bor
Bipolaris oryzae
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bor03009
]
COCMIDRAFT_39393
Ribosome biogenesis [BR:
bor03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
COCMIDRAFT_39393
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Gar1
Motif
Other DBs
NCBI-GeneID:
19123675
NCBI-ProteinID:
XP_007690923
JGI:
Cocmi1_39393
UniProt:
W6Z4L3
LinkDB
All DBs
Position
Unknown
AA seq
856 aa
AA seq
DB search
MSDSLEPPAKRARLEADAPTQYGTSASSASALDAPGSPVDDMDDDFYDTTPVKPSALPTA
VDGTTASSFAAVAPAPAFHLPGLGSTSEAPVAQPQPQPHDGAAAQDEPEDGEFSDGEAFY
DDANANAQAGIPVEPSAANQAQAQHDAPQQGMQSPSELPGANLTSTQDAAAAADTPAADT
DGELDAALTAAIDQQNETEDATFDSKTEFLRAAEANRGDQNAEWQLDSDASDSDSDSSSD
SSSDDSSDEGELLDPEEQVRLLMAEVADDAGASGPVKVKTLNEMDEKFEKPDITVTEDTK
ITELGKVESIVGNLVVVKAKMSGDEQVLESGSALCLQNRTVVGKVSEQIGRVEEPRYSFG
FNDPAELATLGIEKDTTIYYVDEHSTFTETEPIRRQKHTDASNLHDEETNEVEFSDDEKE
AEYKREQKAKKRARADTNEEQAPVNIPTGPRLHVDAPAPPIYRPMEYQGGGLKYSDDEDE
DLGMYKPLARPDHFEQIVGQGAPLEDRSHVRRGMGRGRGPWGDRGRGFRGRGGAGGRGDF
GGARGDRGGYGGGGNGGRGDFGGGRGDRAGQRGDRGAQSNNRGDKGGGEKGGRAGKNQSD
RGKQQEQFQQNNQQQRNGPYQDNRSAASASPARQQQDRNQSYPQQPPSQQSPSGGGGKNK
NRKQRQREKRERERQQQQQQQQQQSQKQQQQNASPAPSGPSNSNAYTTNSNAGWPVPFSG
PSQPAIPYASAPPPPPPAVAASYTPQPSYTPQPPVPAQTQAQPQANQAANWAAWAQWFQV
VGAMSGQQPPQPQMAAQAPAPPPPQPAAAAQYSYPYQAYGQSQAPGMNAPQPGNGQASAQ
SLQDILRALQGGGAPQ
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactctctggaaccgccggccaaaagggcgcggttggaggcggacgctcccaca
cagtatggcacttcagcatcctctgcatctgcgctggacgcgcctggctcgcctgtcgat
gacatggacgacgatttttacgacactacgccagtcaaaccatctgcgctgcctaccgct
gtggacgggacgacagcgtcgtcgtttgcagcggttgcacccgcgccagcctttcacctt
ccaggactcggctctacgagcgaggccccggttgcgcagccgcagccgcagccacacgac
ggcgcggcagcccaagatgagccagaagacggcgagttttcggatggggaggccttttac
gatgatgccaacgcgaacgcgcaggccggcatcccagtcgagccgtctgcagccaatcaa
gcgcaggcccagcatgatgctccacagcaaggcatgcagtctccctctgagctgcctggt
gcaaacttgacgtctacccaagatgctgccgctgcagcagatacccccgccgccgacacc
gatggcgagctcgacgcggcacttactgcagcaatagaccaacaaaacgagactgaagat
gctacattcgacagcaagaccgaattcctgcgcgcggccgaggcaaacaggggcgaccag
aatgctgaatggcagctggactcggacgcctcagactcggactcagactcttcctcggac
tcgagctctgatgacagctcagacgagggcgagctactggatcccgaggagcaggtgcgc
ctccttatggctgaagtcgcagacgatgcaggcgcttcgggcccagtgaaagtcaagacg
ctcaatgagatggatgagaaattcgagaagcccgacatcactgttacagaagacacaaag
atcacagaactcggcaaggttgaatcaattgttggaaatctagtagttgtgaaggccaag
atgtctggagacgagcaagtgcttgagtctggctcagcgctctgtctgcagaaccgcact
gttgttggcaaggtgtctgagcagattggtcgtgttgaagagcctcgctattcatttggc
ttcaatgacccagctgaacttgcgactttaggtatcgagaaggacacaactatttactat
gtcgacgagcactcaaccttcaccgagactgagcccatccgccggcagaagcataccgat
gcatcaaacctccatgacgaagagaccaacgaagtcgagttttcggacgacgagaaggag
gctgaatacaagcgcgagcagaaggccaagaagcgagccagagcggataccaacgaggaa
caggctcctgtgaacatacccactggcccgagactacacgttgatgctccggcaccgcct
atctaccggcccatggagtaccaaggtggtgggcttaaatacagtgatgatgaagatgag
gatttggggatgtacaaaccacttgctcgaccggaccactttgagcaaattgttggccag
ggtgcgcccctggaggatcgtagccatgtgcgaagaggcatgggtcgcggcaggggtcca
tggggcgatcgaggtcgcggatttcgtggccggggaggcgctggcggacgcggtgacttt
ggtggtgctcgcggcgaccgaggaggatacggcggcggcggcaatggcgggcgtggtgat
tttggaggaggtcgtggtgatcgtgcaggacaacggggcgaccgcggggctcagagcaac
aatcgaggcgacaaaggagggggcgaaaagggcgggcgggcgggcaagaatcagtctgac
cgcggcaagcaacaggagcagtttcaacaaaacaaccagcagcagaggaacgggccctac
caagacaaccgatctgctgcctctgcatctccggcacgccaacaacaggaccgtaatcag
tcgtaccctcagcaacccccttcgcaacagtccccctctggaggtggcggcaagaacaag
aaccgcaagcagcgacaacgcgagaagagggagcgagaacgccaacagcagcaacaacag
cagcagcagcagtcccaaaaacaacaacaacagaatgcttctccagcaccttccgggcct
tcgaactctaatgcatatacaaccaacagcaacgcaggttggccagtgccgttttcgggc
ccatcgcaacctgcgataccgtatgcttcagccccgccacctcctccaccagcagtggct
gcatcatatactcctcaaccatcttacacaccgcagcctccagtgccggcgcagacacag
gcacaaccacaggcgaaccaggcggccaattgggcggcgtgggcacagtggttccaggtt
gtgggtgcgatgagcgggcaacaaccaccacagcctcaaatggcagcacaggcccccgca
ccgccaccgccacaaccggcagctgcagcgcagtactcgtatccttatcaggcatatggg
cagagtcaggcaccgggtatgaatgccccgcagccaggcaacgggcaggctagcgcgcag
tcattgcaggatatattgcgggctctccaagggggaggggcgccccagtag
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integrated database retrieval system