Bipolaris oryzae: COCMIDRAFT_40100
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Entry
COCMIDRAFT_40100 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K14774
U3 small nucleolar RNA-associated protein 25
Organism
bor
Bipolaris oryzae
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bor03009
]
COCMIDRAFT_40100
Ribosome biogenesis [BR:
bor03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
COCMIDRAFT_40100
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP25_NTPase-like
Utp25_C
Motif
Other DBs
NCBI-GeneID:
19123811
NCBI-ProteinID:
XP_007691715
JGI:
Cocmi1_40100
UniProt:
W6YW46
LinkDB
All DBs
Position
Unknown
AA seq
731 aa
AA seq
DB search
MTIWLVGHVDILHEIWAEAAVVSGVGDEAEVAQEEEEEVVEEAGSLLQGPPTRLKIRDNV
NIRAPSDSEHSESEGSDSGASEDDDEEEEEAQPAANAYAALLQSFSARDTGSDEPRKKRR
KLEHDHEPEQAATKDTEQLEDAEDNATDREDEAEQGDSDDDQADGDDTKEQELEKAYEKH
FANPDENELAARLKRIAANQWSSHKLRTTSGSAKGFGILQVPSDEVQPPSRRVKSTRDVQ
LKARLVENADKKVGDFDPVEQTIAPSLFGYQDLLFGARTVQNANRLRDITCLHALNHILM
TRDRVLKNNAKLAAASDDDDAEYRDQGFTRPKILFLLETKQACVRILDSITKIYDFEQQE
NKKRFLDSFSLPEDKFSDDKPADFRQLFEGNDENEFRIGVKLTRKTLKLFSTFYNSDIIF
ASTLGLRRAIESGDPKKRDYDFLSSIEMVIMEQADATLMQNWDHTEFVFEHLNLQPKDSH
GCDFSRVRSWYLDGHAPHIRQTIVLSAFLTPKINTLYNKHMRNVAGRLKYTADNTDGLIE
TMSYGVKQTFLRFDSPSHLTDPDARFKYFNTSILPSINRMPRPPEGGLGVLVFIPSYLDF
VRVRNSLVDSDFSYASISEYTDVTDVRKARSHFMNGKHSLLLYTGRAHHFHRYKIRGVKR
VVFYGVPENPIFYDEVVGFIGKTLERAEISREEASVRVCFSKWEKMELERIVGTKRVGKM
VADRGDVFDFV
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgacaatatggttggtggggcacgtcgatattcttcacgaaatctgggcagaggccgcg
gtggtttccggggtaggggacgaggcagaggtggcgcaagaggaagaggaagaggtggtg
gaagaggcgggttcgctgctgcaaggaccgccgacgaggttgaagattcgtgacaatgtc
aacatacgtgcaccgtccgactctgaacacagcgaatctgaaggctccgacagtggtgct
tccgaagacgatgacgaagaggaggaagaggctcaaccagccgccaacgcctacgcagcc
ctcctccaatctttctccgcccgcgatactggctcagacgaaccccggaaaaagaggcgg
aagcttgagcacgatcacgaaccagaacaggccgctaccaaagacacagaacaattggaa
gacgctgaagacaatgcgactgaccgtgaagacgaagcagagcaaggcgattccgacgat
gaccaagcagacggagatgataccaaggaacaggagctggaaaaggcctacgagaaacat
tttgcaaatccagacgagaacgaattggcagcacggctgaaacggatagctgcaaatcaa
tggtcatcgcacaagctgcgcacgacatcaggcagcgcaaagggctttggcattctccaa
gtcccgagcgatgaggtccagccaccctcaaggagagtgaagagcactcgtgacgtacaa
ttgaaggcccggctggtggagaatgcggacaagaaagtcggagactttgacccagtcgaa
caaactattgcgccgtcccttttcggttatcaagatttactgttcggcgcgcgaacagtt
caaaacgccaatcgcctccgggacatcacctgtctgcatgcgctaaatcatattctcatg
acgcgcgatcgtgtactgaagaataacgcaaagctggcagctgcaagtgacgacgacgat
gccgaatatcgcgaccagggctttacgcgccccaagatattgttccttcttgagaccaag
caggcttgtgtacgcatcttggattccatcactaaaatctacgactttgaacagcaagaa
aacaagaagcgatttctcgacagcttttcacttccagaagacaagttctcggacgacaag
cctgcagatttccgccaactattcgaaggcaatgacgaaaacgagttccgtatcggcgtc
aagctgacacgcaagacactgaagttgttctcgactttctacaactccgacatcatcttt
gcttctaccctcggtctgcgccgagcaatcgagtctggcgatcccaagaagcgagattac
gacttcctatcatccatcgagatggtaattatggagcaagcggatgctaccctaatgcaa
aactgggaccatacagagtttgttttcgagcacttgaatcttcagccaaaggattctcac
ggctgcgacttttcacgcgtgcgctcgtggtacctggacggacacgcaccgcacattcga
cagaccattgtgctctcggcgttcctgacgccaaagatcaacacgctgtacaacaagcac
atgcgcaatgtagccgggcgcttaaaatacactgccgataacacagacggtctcatagaa
acaatgtcgtacggcgtgaagcagacgttcctgcgcttcgactcaccatcccatcttact
gatccagacgcacgcttcaaatatttcaacacatccatcttgccatcgattaaccgcatg
ccgcggccgccagagggtggtttgggtgttctagtcttcattccatcctacctggacttt
gtccgcgtgcgcaactcgctcgtcgactcggacttttcatatgcctccatcagcgaatat
accgatgtgaccgacgtgcgcaaagcccgctcacactttatgaatggaaagcactcactg
ttgctgtacacgggccgtgcgcaccatttccaccgctacaagattcgaggtgtcaagcgc
gtcgtgttctacggtgtgccggagaacccgatattctatgacgaagtggtaggcttcatc
ggcaagacgttggaacgtgccgaaattagcagagaagaagccagtgtcagagtgtgcttc
tcaaaatgggaaaagatggagctggaaaggattgttggcacaaagagagtgggcaagatg
gttgcggacaggggtgatgtgtttgactttgtatga
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