Bipolaris oryzae: COCMIDRAFT_40576
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Entry
COCMIDRAFT_40576 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K09578
peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:
5.2.1.8
]
Organism
bor
Bipolaris oryzae
Pathway
bor03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
COCMIDRAFT_40576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bor03021
]
COCMIDRAFT_40576
03110 Chaperones and folding catalysts [BR:
bor03110
]
COCMIDRAFT_40576
Enzymes [BR:
bor01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
COCMIDRAFT_40576
Transcription machinery [BR:
bor03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
COCMIDRAFT_40576
Chaperones and folding catalysts [BR:
bor03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Parvulin
COCMIDRAFT_40576
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rotamase
Rotamase_3
WW
Rotamase_2
X8
Motif
Other DBs
NCBI-GeneID:
19123901
NCBI-ProteinID:
XP_007692269
JGI:
Cocmi1_40576
UniProt:
W6YPC6
LinkDB
All DBs
Position
Unknown
AA seq
192 aa
AA seq
DB search
MSSAETGLPEGWEVRRSNTKNLPYYFHAQTKDSRWEPPAGTDPEKLKAYMAANHSSKGVA
PAASAPTEGKIRCAHLLVKHRDSRRPASWREPNITRSVEEAREMIKKYHEQIKAYEQGQS
DANAKSLSELATTESDCSSARKGGDLGFFGKGDMQKEFEQAAFALEKGQVSDMVETASGV
HLIQRWDDYHMS
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgccgagactggtctccccgaggggtgggaggtgcgccggtcgaacacgaag
aacctgccatactactttcatgcgcaaaccaaggactcgcgatgggaaccgcctgcgggc
accgatccggagaagctcaaggcgtacatggcggccaaccacagctccaaaggcgttgcg
cctgctgcctctgcgccgaccgaaggcaagattcgatgtgctcatctgcttgtcaagcac
cgcgacagtagacgccccgctagctggcgggaacccaacatcacgcgttcggtggaggag
gctcgcgagatgatcaaaaagtaccacgagcagatcaaggcatacgagcagggccagagt
gatgcaaacgcaaagtcactgtctgagctggcaacgaccgagtcggactgcagcagcgcc
cgcaaaggaggcgaccttggcttttttggcaaaggcgacatgcagaaggagtttgagcag
gcagcatttgcgcttgaaaagggccaggtcagcgacatggtggagacggcatcaggagta
catttgatccaaaggtgggacgactatcacatgagctga
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