Bipolaris oryzae: COCMIDRAFT_4085
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Entry
COCMIDRAFT_4085 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
bor
Bipolaris oryzae
Pathway
bor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
COCMIDRAFT_4085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bor03400
]
COCMIDRAFT_4085
Enzymes [BR:
bor01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
COCMIDRAFT_4085
DNA repair and recombination proteins [BR:
bor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
COCMIDRAFT_4085
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
19123951
NCBI-ProteinID:
XP_007686537
JGI:
Cocmi1_4085
UniProt:
W6ZT92
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
MSLRRSARVASTTVTKLADSSSQNGVAKYEKADKSNATAKKRKTSKAAPKSQPPGDVSEK
PGAKENTNGTIEQPIPDIESPSDPVTPLPKKRKSKPTAESPIKPVPFTPTPAAVTLLSKG
RTDFDHPLDDLSTLQPRPAEPHATNAPLATPNGSHTVQAYGSSPVKPEDATPARKRKAKE
VVPPDVGAIPSASTNIDRLLKDAEAHLVSVDPKLKTLIEKHHCKIFSPEGLREVVDPFTA
LSSGIIGQQVSSAAAASIRSKFTALFPSTHPSFPSPSQVLSLPLPTLRTAGLSQRKAEYI
QGLAEKFASGELSAEMLVSASDEELIEKLVAVRGLGRWSVEMFACFGLKRMDVFSTGDLG
VQRGMAVYAGRDVSKLKNKGGKWKYMSEQEMLATAAKFSPYRSLLMWYMWRIADVDVTVL
QKS
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtctctaagacgctctgcacgcgtcgcaagtactactgtaacaaaattagcagattca
agtagtcaaaatggcgttgcaaagtatgaaaaggccgacaaatcaaatgcaacggcaaag
aagcgcaagacttcgaaagccgcgcccaagtcgcaaccacctggcgatgtatcagagaag
cctggagccaaagaaaacaccaacggaaccatagaacagccaattccggatatcgaatcc
ccatctgaccccgtaacgcctcttccaaagaaacgcaaatcgaagccaactgcagaatcg
ccaataaagccagtcccttttacacccactcctgcagccgtcacgcttctctcaaaaggc
cgaacggacttcgaccacccactggacgatctttccaccctgcaaccccgtcccgcagaa
ccacatgccacaaacgcaccccttgcaacaccaaacggctcccacaccgtccaagcctac
ggatcctcaccggttaagcccgaagacgcaacacccgctcgcaagcgcaaagctaaagaa
gtggtacctccggatgtgggggcgatccccagtgcaagcacgaacatcgatcgcttgctg
aaagacgcagaagcgcatttagtgagcgtagaccccaagttgaagaccctcatcgaaaaa
caccattgtaagattttcagtccagagggactacgagaagtcgtagatccgtttacagca
ctgagctctgggattattggacaacaggtctcaagcgcagccgccgcctccattcgctca
aaattcacagccctctttccttccacccacccttcctttccttcaccctcccaagttcta
tctctccccttacctaccctgcgtacagcggggttatcccagcgcaaagcagaatatatc
cagggtcttgctgagaaattcgcctcaggtgaattatccgctgagatgctagtcagcgcc
agcgacgaagaactgattgagaagcttgtcgcagtacggggattggggcgctggagtgtg
gagatgtttgcctgttttgggctcaagaggatggatgtttttagcacgggagatttgggt
gtgcaacgcggcatggccgtttacgccggccgtgatgtgagtaaacttaagaacaaaggt
gggaagtggaaatatatgagcgagcaagaaatgcttgctacagctgccaaattctcgccg
tatagatcactcctcatgtggtacatgtggcgcatagccgatgtcgatgtcactgtcttg
caaaagtcgtga
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