Bipolaris oryzae: COCMIDRAFT_42054
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Entry
COCMIDRAFT_42054 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K14411
RNA-binding protein Musashi
Organism
bor
Bipolaris oryzae
Pathway
bor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
COCMIDRAFT_42054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bor03019
]
COCMIDRAFT_42054
Messenger RNA biogenesis [BR:
bor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
COCMIDRAFT_42054
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
TMEM156
DUF7237
Motif
Other DBs
NCBI-GeneID:
19124167
NCBI-ProteinID:
XP_007688585
JGI:
Cocmi1_42054
UniProt:
W6Z583
LinkDB
All DBs
Position
Unknown
AA seq
168 aa
AA seq
DB search
MFIGGLNWETTEDSLKGYFSQFGEVSECTVMRDSATGRSRGFGFLTFKDPKCVNIVMVKE
HYLDGKIIDPKRAIPREEQERTSKIFVGGVSQEATEEDFTNFFKQFGRVVDATLMMDKET
GRPRGFGFVTFDGDAAVDATLRGPLQILGKQIEVKRAQPRGNMRDDDG
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atgttcatcggcggtctaaattgggagactactgaagattccctcaagggctacttctca
caatttggtgaggtcagcgagtgcacggttatgcgcgattctgctactggccgatctcga
ggttttggtttccttacctttaaggaccccaaatgcgtcaacattgttatggtaaaagag
cactatctagacggcaagatcattgacccaaagcgggctattcctcgtgaagaacaagag
cgaaccagcaagatctttgttggcggtgtcagccaggaagcaacggaggaagattttaca
aactttttcaagcaatttggccgtgtggtcgatgccaccctcatgatggacaaggaaacg
ggccgccctcgtggcttcggtttcgttacctttgacggcgatgcggcagtagatgctaca
ctacgcggcccacttcagattctcggcaagcaaatcgaagttaagcgcgcccagcctcgc
ggaaacatgcgtgacgacgacggt
DBGET
integrated database retrieval system
