Bipolaris oryzae: COCMIDRAFT_442
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Entry
COCMIDRAFT_442 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
bor
Bipolaris oryzae
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bor03021
]
COCMIDRAFT_442
Transcription machinery [BR:
bor03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
COCMIDRAFT_442
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRN3
RNA_pol_Rpc4
Motif
Other DBs
NCBI-GeneID:
19124226
NCBI-ProteinID:
XP_007682485
JGI:
Cocmi1_442
UniProt:
W6ZTL9
LinkDB
All DBs
Position
Unknown
AA seq
695 aa
AA seq
DB search
MVSLASNPHSPLVVAPGTGGSSLKRKQSDHSSDAETTASGQLKKRRVTFHPEVDVHVLRE
YNEKSAELVGEEVRRAMEKHATGEKAAYDGLRALFREAPTSPNAPSSQLLQKYLVALTGH
TPQLDHNCKGLVHAVIDCSWVARNEDFVRSYRNFLRSLLSVQSGYMSTVLQMLVDMFLDL
PSVNARQHDDPPIQRVRLLARVHETLVLILRYTPMVSSYLAPIIASTFPFSNESAKKHAE
YIRNIYQITEYAPEIRGEVLTLVTDKLCKIDAQMQMDMEDIDDDLEERLVGDAIHNEEDD
DDMSDDGSVSSHESLEPEEQRLKDIKDTMLKLDTVMDVQFAYYDSIFEKGDLLEMDRTYQ
SLIAQFQSIIIPTYRSRHTQFILFHFSQLSTDFMERFVDTCSHLAIDSNRPPLLRASACA
YLASYIARGAHVPGFVVRNVFDLLCSQLERLRMLHEPKCTGPDLRRYGTYYAIAQALLYA
FCFRWRDLIVTPDGSLPTDADIMYHEGDFEWHRSTLEIVRRNIFCKLNPLRICAPDIVKQ
FGRIAKHLRFTYVDTLVETNKRVRLARSLASSYLTGIGGRETALTGKKGEEAFLMDAYFP
FDPYVLPRSKRWVEHDYVQWRPVPGMPVEKDEDDEDEDDEEDDDDDDEEDEEGDDEDDRT
SDQDEEEDDDDDDSDDEVGGAHADDLDDGSTEASV
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggtttcacttgcttcgaatccccactcgccgctcgtcgtcgccccaggcacgggtggc
agcagcctcaaacgcaaacaatccgaccattcgtccgacgccgagaccacggcttcaggc
cagttgaagaagcgcagagtcaccttccaccccgaagtcgatgtgcatgtactgcgcgag
tacaatgagaagagcgcagagctggtgggggaggaggtgcgtcgggctatggagaagcac
gccacaggcgagaaggcagcatacgacggactccgagccctcttcagggaagcacccacc
tcacccaacgcgccatcctcgcaactcctccaaaagtacctcgttgccctcactggccac
acgccgcagcttgaccacaactgtaaaggcctggtccatgccgtcatcgactgcagttgg
gtcgctcgcaatgaagactttgtgcgctcctatcgcaacttcctacgctcgttgctctca
gtacagtctggctacatgtcgactgtgctgcaaatgcttgtcgacatgttcctcgacctg
ccgtcggtaaacgctaggcaacacgacgaccctccaatccagcgagttcgcctcctggca
cgcgtccacgagactctggtcttgatacttcgatacactcccatggtcagctcctacctg
gcccccattattgccagcacatttcccttttccaatgagagtgctaagaagcacgctgag
tacatccggaacatctaccaaatcactgaatacgccccagagatccgaggtgaggtcctc
acgctagtgacagacaagctatgcaagatagacgcgcagatgcagatggacatggaggac
atagacgacgatctagaggagcgacttgtgggcgacgccatccacaacgaagaagatgac
gacgacatgagtgatgatggctctgtctcgagccacgaaagtctcgagccagaagagcag
cgactcaaggacatcaaggacaccatgctcaagctcgataccgtcatggacgttcagttt
gcctattacgactccatcttcgagaagggcgaccttttggagatggaccgcacctaccag
tctctcattgcacagttccaatccatcataattccgacataccgatcgcggcacacccaa
ttcatcctcttccactttagtcaactgtcgacggatttcatggagcgcttcgtcgatacc
tgttcacatcttgccattgactcaaaccggcctccactactacgggcatcggcatgcgcc
taccttgcctcgtacattgcccgcggcgcacatgttcccgggtttgttgtgcgtaacgtc
tttgaccttttgtgctcgcaactcgagcgtttgcgtatgctgcacgagccaaagtgtaca
ggacctgacctacggcgctacggcacatactatgccattgcgcaagcactgctctacgcc
ttttgcttccgatggcgcgacctcatcgttacgcctgacggctcactacctaccgacgcc
gacattatgtatcacgagggtgattttgaatggcatcggtcaacgcttgaaattgtacgc
cgcaacatcttctgcaaactcaatccgctcaggatatgcgcaccagacattgtcaagcag
ttcggccgtattgccaagcacctccgcttcacctacgttgatacattggtggagacaaat
aagcgtgtacggctcgcccgcagtcttgccagcagctatctcactggcataggaggtcga
gagacggctctgacgggcaagaagggagaagaagcgtttttaatggatgcgtactttccg
tttgatccttatgttctgccacgcagtaaacgatgggttgagcatgattacgtacaatgg
cgaccggttcctggtatgcctgtggaaaaggacgaagatgacgaagatgaagacgacgag
gaggatgacgatgacgatgacgaggaagatgaagaaggcgatgacgaagatgaccgcact
tctgatcaagacgaagaagaggacgacgacgacgacgacagcgatgacgaagtgggtgga
gcgcacgctgatgaccttgatgacggtagtacagaggcaagcgtttga
DBGET
integrated database retrieval system
