Bipolaris oryzae: COCMIDRAFT_4558
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Entry
COCMIDRAFT_4558 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K23358
transcription initiation factor TFIID subunit 1, fungi type [EC:
2.3.1.48
]
Organism
bor
Bipolaris oryzae
Pathway
bor03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
COCMIDRAFT_4558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bor03021
]
COCMIDRAFT_4558
03036 Chromosome and associated proteins [BR:
bor03036
]
COCMIDRAFT_4558
Enzymes [BR:
bor01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
COCMIDRAFT_4558
Transcription machinery [BR:
bor03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
COCMIDRAFT_4558
Chromosome and associated proteins [BR:
bor03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
COCMIDRAFT_4558
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3591
zf-CCHC
zf-CCHC_6
Motif
Other DBs
NCBI-GeneID:
19124286
NCBI-ProteinID:
XP_007687086
JGI:
Cocmi1_4558
UniProt:
W6Z8R4
LinkDB
All DBs
Position
Unknown
AA seq
1124 aa
AA seq
DB search
MDDEHNPTASSHSDAAEDEDFARIMRQAQMGAAEGEEDLLSGIASRPLEAGEKADDAVDY
EDIGDDDLPEEEFESGGGDDDAGINFSGTTMQDSGGTLDNGDVDMDDLFGDGDAQDDLFG
DDPDHSDPTRENTQHKDDPLTSIEDLVQEGFNVAGQDKSQQSSRTNAQTATQEEEEEEED
PEVREQLALFAQSLRKKDELADAPKKTSREEFEKIWPNFEADKPPRFFSLVPRKRAFYIP
KVPPKAPRPFQMNKLTLDIAPDQEKSFRLHPTTTAKSGRQQEEEQGGIIQITSTAEDDGD
GNEQMDFDHFDTIDDHEMIGNVSWSDLRIACEDWEVPDDSNAAILSENGQAPTPPDSVNA
GQSPSKKRRLGDHDQSIQFSVYDHMDLPTWDDPELETAKLSKKILLDMNDPHLLLDVQQP
SAEPPKPRTLGLGLKRDSRGSLANPMFKRYNISNDEAYDALKESSQQKVRSTIGHMNVEH
SLPALKLQYPFYKVALSDRELRSFHRPTITFKPGERASISSLKSVKRKHKKNLKPSEAFA
TAEDLNIGDNSDLLLAEYSEEYPTTLSNFGMGIKILNYYRRKDMEDTARPKPEDGIGETS
ILLPQDKSPFSLFGQVEPGQQVLTLHNAMYRAPVFKHKPEETDFLVSRSWTGVNGPRYYM
RTIPNLMVVGQQFPSVEVPGTHARKVTEASKKRLKMLAFRLYRKGQQRGARQPWVSNEMI
KQHLPGTEIAQNRSRMREIMKYQKDIGTWEPVPGETVPEEPILRTWIKPEDVCLIDSMHA
GDKQLQDAGIKSNEIRDDDDEADNENADVKLAPWNTTKNFLNACAGKAMLELHGEGDPTG
QGLGFSFIKVSMKGGFRDVGESAADRLDSKKMKELGGHSYNVQRQQVMYENAIKRIWNKQ
KESLSAQNPPSDTEDDVDTAVPRNNLPRQRSEMGTPATMRHDDETMSQMSRNSNADNRGK
KLKITRTIKNKYDEYEDVTEIITDPAVIQLYIKHKRQERLLNMRIEDIKPTGDPEVDKAQ
QIKLKAELARLARNIERREGREKAKGLHKSQTGEGGVTGGPGKGGATPRKCANCGEVGHI
KTNKKLCPLLNGQRKQNDTFKDANAASPATATVPATPSFAGSPS
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgagcacaacccaacggcgagcagccacagcgacgcagcggaagatgaagac
tttgcaagaatcatgcgccaggcgcaaatgggggcggcggaaggcgaagaagacttgtta
agtggcatcgcctcgcgtccacttgaggctggcgagaaggcggatgatgccgtggattac
gaggatattggcgatgatgatctgcctgaagaagagtttgagtctggcggaggcgatgac
gacgccggtatcaactttagcggaaccacaatgcaggactccggtggcacactcgataac
ggcgacgtggatatggatgatttgtttggcgatggcgatgcacaggacgacctttttggc
gatgacccagatcattcagatcctacacgggaaaatacacagcacaaggacgacccactc
acatccatcgaggatctagtccaagaaggcttcaacgtggctggtcaggacaagtcgcaa
cagagcagccgcaccaatgcacaaacggcgactcaggaggaagaggaagaggaggaagac
ccggaagtgcgtgaacagctggccctcttcgcccagtctcttcgcaagaaggatgagtta
gcggatgcacctaagaagacatcaagagaggaatttgagaagatttggcccaactttgag
gcagacaaaccgccacgtttcttcagtctcgtaccgcgaaaacgcgccttttacatccca
aaagttccgccaaaggcaccaaggccgttccaaatgaacaaacttactctggacatcgca
ccagatcaggagaagagttttcgattacatcccacgaccaccgccaagtccggccggcaa
caagaggaggagcaaggtggaatcatacaaatcacgagcactgcagaagatgatggtgat
gggaacgagcagatggatttcgatcactttgatacgattgacgatcacgaaatgattggc
aatgtatcatggagcgaccttagaatcgcctgtgaggactgggaagttccagatgactca
aacgctgcaatcctttccgagaacggtcaagcaccaactccacctgatagtgtcaatgct
gggcagtcaccgagcaagaaacgcagactcggagaccacgaccagtccatccagttttct
gtgtacgatcacatggatttgcccacttgggacgatcctgagctggagacggcaaagctg
tcaaagaagattctcctggacatgaatgaccctcatctcctgctggatgtacaacagccg
agtgcagagcctccaaagcctcgaacattgggcctgggactcaagcgcgatagtcgcggc
agtcttgcaaaccctatgttcaagcgctacaatatttctaatgatgaggcatatgacgcg
ctcaaagaaagcagccaacagaaggtccgtagtactattggacacatgaacgttgagcac
agtctgcccgcactcaagttgcaatatcctttctacaaggttgcactttccgatcgcgag
cttcgatctttccatcggcccaccattacattcaagcctggtgagcgagccagtatctcg
tcactcaagtcagtcaaaagaaagcacaagaaaaacctcaagccatccgaggccttcgct
accgcagaagacctcaacattggtgataactcagatctcctcctcgctgaatactcggaa
gagtaccctaccactttgtccaactttggcatgggcatcaagattctcaactactaccgg
cggaaagatatggaagacacagcacgtccgaaaccggaagatggaattggggaaacttcg
atcctgctaccacaggacaagagtcctttctctctgtttggccaagtcgagccaggccag
caggtactaacgctccacaacgccatgtatagagcgccagtgttcaagcacaagcctgaa
gagaccgatttcctcgttagcagaagctggactggggttaatggccccaggtactacatg
cggactattcccaaccttatggtggttggtcagcagttcccatccgtcgaggtgcctggt
acacatgcccgaaaggttactgaagcatcgaagaagcgactcaagatgctggcgttcaga
ttgtaccgaaaaggacaacagagaggagcgcgacaaccttgggttagtaacgagatgatc
aagcagcatcttcccggtactgaaattgcgcaaaatcgctctcgaatgcgcgagatcatg
aagtaccaaaaggacataggtacttgggagcctgtgcctggcgagactgtgcctgaagag
ccaattttgcgcacttggataaagccggaagacgtttgtcttattgactccatgcatgct
ggtgacaagcagcttcaggacgccggtatcaagtcgaatgagatccgtgatgacgacgat
gaagcagacaacgaaaacgccgatgtcaagttggcgccgtggaacactacgaagaacttc
ttgaatgcatgtgccggcaaggctatgctggagcttcatggagaaggtgaccctactgga
caaggcttgggattcagtttcatcaaagtctcgatgaagggtggctttagggatgttggt
gagagtgccgctgatcgacttgatagcaagaagatgaaggaactcggcggtcacagctac
aacgtacagcgccagcaggttatgtatgagaacgctatcaagcgtatttggaacaagcag
aaggagagtctatctgctcagaacccgccttccgataccgaggacgatgtcgacacagcc
gtgccccgcaacaatctcccacgtcaacgttctgagatgggaacgccagctacaatgcgg
catgacgatgaaacaatgtcgcaaatgtctcgcaatagcaatgcagacaaccgcggcaag
aagctcaagatcacacgaaccatcaagaacaagtacgacgagtacgaggacgtcacagaa
atcatcacagatccagctgtcattcaactctacatcaagcacaagcgccaagagcgtctg
ctgaacatgcgtatcgaagacatcaagcccaccggcgaccctgaagtagacaaggctcag
caaatcaagctcaaggccgagcttgcccgtctcgcccgcaacatagaacgtcgtgagggt
cgagaaaaggcaaagggcctacacaaatcacagacaggcgaaggaggcgtaaccggtggt
ccaggaaaggggggagcaacacctcgcaagtgcgctaactgcggcgaggtgggccacatc
aagacgaacaaaaagctctgtcctctcctcaatggccagaggaaacaaaacgacactttc
aaagatgcgaatgctgcatcaccggctactgcgactgttcctgccactccttcttttgct
ggttcaccgtcttga
DBGET
integrated database retrieval system
