KEGG   Bipolaris oryzae: COCMIDRAFT_4688
Entry
COCMIDRAFT_4688   CDS       T03125                                 
Name
(RefSeq) hypothetical protein
  KO
K10752  histone-binding protein RBBP4
Organism
bor  Bipolaris oryzae
Pathway
bor03082  ATP-dependent chromatin remodeling
bor03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:bor00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    COCMIDRAFT_4688
   03083 Polycomb repressive complex
    COCMIDRAFT_4688
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bor03036]
    COCMIDRAFT_4688
Chromosome and associated proteins [BR:bor03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     COCMIDRAFT_4688
  Histone modification proteins
   HAT complexes
    HATB complex
     COCMIDRAFT_4688
   HDAC complexes
    Sin3A-HDAC complex
     COCMIDRAFT_4688
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     COCMIDRAFT_4688
    PRC2.2
     COCMIDRAFT_4688
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     COCMIDRAFT_4688
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    COCMIDRAFT_4688
  Chromatin remodeling factors
   NuRD complex
    COCMIDRAFT_4688
   NuRF complex
    COCMIDRAFT_4688
   NuRF complex (fruit fly)
    COCMIDRAFT_4688
SSDB
Motif
Pfam: WD40_Prp19 WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd WDR55 EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML NBCH_WD40 Beta-prop_WDR75_1st WD_LRWD1 MIOS_WD40 ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_SPT8 WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_SCAP
Other DBs
NCBI-GeneID: 19124340
NCBI-ProteinID: XP_007687263
JGI: Cocmi1_4688
UniProt: W6Z893
LinkDB
Position
Unknown
AA seq 433 aa
MDETMSDAHDSHEMDDQEQVEQKIINEEYKIWKKNSVFLYDMLYGRALEWPTLTTQWLPD
KKPVEGTNMSQHRVILGTHTSNQAQNYLQIAHCEIPDFREPDLSELNEERGEIGGHGNAK
RPFDFKIVQKINHPGEVNKARYQPQNPDIIASLCVDGKVLVFDRTKHPLQPKDDSIKFEA
ELVGHSKEGFGLSWSPLKEGHLVTGNEDTTVKTWDLKSGFSKSNKTLSPTATYTVHSATV
NDVQYHPIHNFLIGTASDDLTWQIIDTRMETHKKALYRKEAHEDAVNCISFHPEFESTFA
TGSADKTVGIWDLRNFDKKLHSLQSHRSDVIGLQWHPQDAAILASSSYDRRICLWDLSKI
GSEQTEEEAEDGPPELLFMHGGFTNRICDFDWNKNDPWLMMGAAEDNQLQIFRPSRKLVE
PLKKSVNHGEVSD
NT seq 1302 nt   +upstreamnt  +downstreamnt
atggacgagacaatgagtgacgcccacgactcgcatgagatggacgaccaggagcaggtc
gaacagaagatcatcaacgaagagtacaagatatggaagaagaactctgtatttctctat
gacatgctgtacggccgcgcgctcgagtggccaaccctcaccacccaatggcttcccgac
aagaagccagtcgaaggcacaaacatgagccagcaccgcgttatcctcggcacccacacc
tcgaaccaagcgcaaaactacctccagatcgcccactgcgagatacctgactttcgcgag
cccgacctgtcagagctgaatgaagagcggggagagattggtggacacggcaatgccaag
cggcctttcgacttcaagattgtacaaaagatcaaccacccaggcgaggtcaacaaggcg
cgataccagccccaaaacccagacataatagcatctctatgcgtagacggcaaagtcctt
gtattcgaccgaactaaacaccccctccaacccaaagacgactcaattaagttcgaagct
gagctcgtcggccacagcaaagaaggtttcggtctaagctggagccccctcaaagaaggc
cacttggtaaccggaaacgaagacaccacagttaagacctgggatctcaaatccggcttc
tcaaagagcaacaaaaccctcagccccacggccacctacaccgtccatagcgcaaccgta
aacgacgtccaataccaccccatccacaacttcctcattggcaccgcctcggacgacctc
acctggcaaatcattgacacccgcatggagacccacaagaaagccctctacagaaaagaa
gcccacgaagacgccgtaaactgcatctccttccatccagaattcgaaagcacgtttgct
acgggctctgcggacaaaacagtcggtatctgggacttgcgaaactttgacaagaagctg
catagccttcagagccaccgttccgacgtcatcggcctccagtggcacccgcaggacgct
gctatcctcgcgagttccagctacgatcgccgtatttgtctctgggatctcagcaagatt
ggatctgagcagacggaggaagaggccgaggatggaccgcctgagctattgttcatgcac
ggcggtttcacaaacaggatctgtgactttgattggaataagaatgacccttggcttatg
atgggtgcggcggaggataaccagttgcagattttccggccctcgaggaagcttgtggag
ccgctgaagaagagtgtgaatcatggggaggtgtcggattga

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