Bipolaris oryzae: COCMIDRAFT_4688
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Entry
COCMIDRAFT_4688 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K10752
histone-binding protein RBBP4
Organism
bor
Bipolaris oryzae
Pathway
bor03082
ATP-dependent chromatin remodeling
bor03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
COCMIDRAFT_4688
03083 Polycomb repressive complex
COCMIDRAFT_4688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bor03036
]
COCMIDRAFT_4688
Chromosome and associated proteins [BR:
bor03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
COCMIDRAFT_4688
Histone modification proteins
HAT complexes
HATB complex
COCMIDRAFT_4688
HDAC complexes
Sin3A-HDAC complex
COCMIDRAFT_4688
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
COCMIDRAFT_4688
PRC2.2
COCMIDRAFT_4688
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
COCMIDRAFT_4688
Heterochromatin formation proteins
Other heterochromatin formation proteins
COCMIDRAFT_4688
Chromatin remodeling factors
NuRD complex
COCMIDRAFT_4688
NuRF complex
COCMIDRAFT_4688
NuRF complex (fruit fly)
COCMIDRAFT_4688
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
NBCH_WD40
Beta-prop_WDR75_1st
WD_LRWD1
MIOS_WD40
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
19124340
NCBI-ProteinID:
XP_007687263
JGI:
Cocmi1_4688
UniProt:
W6Z893
LinkDB
All DBs
Position
Unknown
AA seq
433 aa
AA seq
DB search
MDETMSDAHDSHEMDDQEQVEQKIINEEYKIWKKNSVFLYDMLYGRALEWPTLTTQWLPD
KKPVEGTNMSQHRVILGTHTSNQAQNYLQIAHCEIPDFREPDLSELNEERGEIGGHGNAK
RPFDFKIVQKINHPGEVNKARYQPQNPDIIASLCVDGKVLVFDRTKHPLQPKDDSIKFEA
ELVGHSKEGFGLSWSPLKEGHLVTGNEDTTVKTWDLKSGFSKSNKTLSPTATYTVHSATV
NDVQYHPIHNFLIGTASDDLTWQIIDTRMETHKKALYRKEAHEDAVNCISFHPEFESTFA
TGSADKTVGIWDLRNFDKKLHSLQSHRSDVIGLQWHPQDAAILASSSYDRRICLWDLSKI
GSEQTEEEAEDGPPELLFMHGGFTNRICDFDWNKNDPWLMMGAAEDNQLQIFRPSRKLVE
PLKKSVNHGEVSD
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggacgagacaatgagtgacgcccacgactcgcatgagatggacgaccaggagcaggtc
gaacagaagatcatcaacgaagagtacaagatatggaagaagaactctgtatttctctat
gacatgctgtacggccgcgcgctcgagtggccaaccctcaccacccaatggcttcccgac
aagaagccagtcgaaggcacaaacatgagccagcaccgcgttatcctcggcacccacacc
tcgaaccaagcgcaaaactacctccagatcgcccactgcgagatacctgactttcgcgag
cccgacctgtcagagctgaatgaagagcggggagagattggtggacacggcaatgccaag
cggcctttcgacttcaagattgtacaaaagatcaaccacccaggcgaggtcaacaaggcg
cgataccagccccaaaacccagacataatagcatctctatgcgtagacggcaaagtcctt
gtattcgaccgaactaaacaccccctccaacccaaagacgactcaattaagttcgaagct
gagctcgtcggccacagcaaagaaggtttcggtctaagctggagccccctcaaagaaggc
cacttggtaaccggaaacgaagacaccacagttaagacctgggatctcaaatccggcttc
tcaaagagcaacaaaaccctcagccccacggccacctacaccgtccatagcgcaaccgta
aacgacgtccaataccaccccatccacaacttcctcattggcaccgcctcggacgacctc
acctggcaaatcattgacacccgcatggagacccacaagaaagccctctacagaaaagaa
gcccacgaagacgccgtaaactgcatctccttccatccagaattcgaaagcacgtttgct
acgggctctgcggacaaaacagtcggtatctgggacttgcgaaactttgacaagaagctg
catagccttcagagccaccgttccgacgtcatcggcctccagtggcacccgcaggacgct
gctatcctcgcgagttccagctacgatcgccgtatttgtctctgggatctcagcaagatt
ggatctgagcagacggaggaagaggccgaggatggaccgcctgagctattgttcatgcac
ggcggtttcacaaacaggatctgtgactttgattggaataagaatgacccttggcttatg
atgggtgcggcggaggataaccagttgcagattttccggccctcgaggaagcttgtggag
ccgctgaagaagagtgtgaatcatggggaggtgtcggattga
DBGET
integrated database retrieval system