Bipolaris oryzae: COCMIDRAFT_4867
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Entry
COCMIDRAFT_4867 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
bor
Bipolaris oryzae
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bor03009
]
COCMIDRAFT_4867
Enzymes [BR:
bor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
COCMIDRAFT_4867
Ribosome biogenesis [BR:
bor03009
]
Eukaryotic type
90S particles
Helicases
COCMIDRAFT_4867
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25_NTPase-like
EMC1_C
Motif
Other DBs
NCBI-GeneID:
19124411
NCBI-ProteinID:
XP_007687452
JGI:
Cocmi1_4867
UniProt:
W6Z2P7
LinkDB
All DBs
Position
Unknown
AA seq
750 aa
AA seq
DB search
MNVFKLLSRSSQAAPSSHAQKLPSSGAVANPQLFGHNEPPQSPDSSNSSRKRKRGQNVVD
SESSSAALPADLDFFGGGAGRDAQTGGDKLSKKQRKKQKKQEREEAANLEKEINDIQQEP
YDVEECKRILRSHKLKVAVLEDFAPQTEEPRKEKKSKKKKKKEQEKIEEKKKDTKKTLYP
QPITSFAQLRTRYGISRRLAENIIEQGYKLPTEVQLGALPLLLRKKGEPGLMQDVENLSG
AEYNGDIDLLTVAPTGSGKTIAFLIPIIDALLSESKSTEAKSGPRAVILAPTRELASQIV
NEARKLAKATAVKATLMRKGMQVVTHEEDDTEKTKDDEAKDLSEASDDDDDESGSEDEEK
EAPKKKQTGRRAELVKAAILVSTPLALVNSLKRKDGTIASIPSISQLVLDEADVLLDPLF
REQTLAVWNACTNPHLRVGLWSATMGSNIESLAISTLNDRWSAISSPQSAFPPRPPLIRL
VVGLKDSAIPNISHQLTYAATEQGKLLGLRQLLHPTALHTDSSQPILRPPFLVFTQTIPR
AIALHSELLYDIPPEAGGSSRIAVLHADLSSSARDTIMTRFRKGEIWVLITTDLLARGID
FRGLNGVVNYDAPSSAAAYVHRVGRTGRAGRTGGVAVTFYTQDDIPYVKLIANVIRASEA
LRGVGADEGSVKQWLLDALPTPSKRDRQVLKRRGVEARRTGKKSRISSKSGYERKIENMR
REKREKARRKDNQESGSEGGEGEGEFKGFD
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtattcaagctcctctcgcgatcttcccaagcggcgccgagctcgcacgcgcaa
aagcttccttcctccggcgccgtcgcaaacccgcagctcttcggtcacaacgagccacca
cagtcacctgattcgtccaactcgagtcgcaaacgaaagcgagggcagaatgtcgtagat
tcagagtctagttctgctgccttacccgcagacctcgatttctttggtggaggcgcaggc
agagacgcacagactggcggggacaaattatccaagaagcagagaaagaagcagaagaaa
caggagcgggaagaggcggcgaacttggaaaaggaaataaacgatatccagcaagaaccg
tacgatgttgaggaatgtaagaggatactgcgctcgcacaagctaaaggttgccgtgttg
gaggactttgcgccacaaacagaagagccgcgcaaggagaagaaatcgaaaaagaagaag
aagaaggaacaggagaagatcgaggagaaaaagaaggatacgaagaagacattataccct
cagcccatcacatcgtttgcgcaactgcgaacgcgttacggcatatcgagacgcctcgca
gagaatataatagagcagggttacaagttgccgacggaagttcaactgggagccttgcca
ctattgttgcgcaagaagggtgagccaggactcatgcaagacgttgagaatttgtctggg
gcggagtacaatggagatatcgaccttttgacggtcgcacctacgggcagcggaaagact
atagcgtttctcataccgatcatcgatgcgctgctttcggaaagcaagagcacggaagcc
aaaagtggtcctcgtgcggtcatacttgcccccacaagggagctggcgtcgcagattgtg
aatgaagcaaggaaactggcaaaggctactgcagtcaaggctacgcttatgaggaaaggc
atgcaggtggtgacacatgaggaagatgacactgaaaagacaaaagacgatgaggccaaa
gacttgtccgaagcctccgacgatgacgatgatgaatctggatcagaagatgaagagaag
gaagcaccaaaaaagaagcagacaggccgtcgagcagagcttgtgaaggctgctatcctc
gtctcaactccccttgctcttgtgaattctctgaagcgcaaagatgggaccattgcaagc
atccctagcatatctcaacttgtcctcgacgaagccgatgtcctcctcgatcctctgttc
cgcgaacaaactctggctgtatggaatgcatgcacaaatcctcaccttcgtgttggcctc
tggtcagcgacaatgggatcaaatatcgaaagtctagcaatatctactctaaacgaccgc
tggtctgccatttcctcaccacaatccgcttttccccctcgaccaccactaatccgcctc
gtcgttggtctcaaagacagcgccatcccaaacatatcccaccaactaacctatgccgcg
accgagcaaggcaaactcctaggcctccgtcaactccttcacccaaccgccctccacacc
gactcatctcaacccatactccgtcccccctttctcgtcttcacccaaaccatcccacga
gccatagccctccactccgaactcctctacgatatcccccccgaagcgggcggcagctct
cgcatcgccgtactccacgcggacctcagctcctccgcccgcgacacaatcatgacgcgc
ttccgcaaaggcgaaatctgggtcctcatcaccaccgatctgctcgcccgcggcatcgac
ttccgcggcctcaacggcgtcgtaaactacgacgccccgtcctccgccgccgcctacgtg
catcgtgtcggccgtactggccgcgccggccgcacgggaggcgtcgcggtcacgttttac
acccaagacgacattccctacgttaaactcatcgccaacgttatccgagcgtcggaggcg
ctgaggggggttggcgccgatgagggcagtgtcaagcagtggttgctggatgcgctgccg
acgccgtcgaagagggatagacaggtgcttaagaggaggggggttgaggcgagacggacg
gggaagaagagtaggattagtagtaagagtgggtatgagagaaagattgagaatatgcgg
agggagaagagggagaaggcgaggaggaaagacaatcaggaaagtgggagtgagggtggg
gagggcgagggtgagtttaagggatttgattag
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