Bipolaris oryzae: COCMIDRAFT_4932 Help Entry COCMIDRAFT_4932   CDS       T03125                                  Name (RefSeq) hypothetical protein   KO K18664   antiviral helicase SLH1 [EC:5.6.2.6] Organism bor  Bipolaris oryzae Brite KEGG Orthology (KO) [BR:bor00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:bor03019]     COCMIDRAFT_4932 Enzymes [BR:bor01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      COCMIDRAFT_4932 Messenger RNA biogenesis [BR:bor03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      COCMIDRAFT_4932 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Sec63 DEAD SNRNP200_wHTH ResIII Helicase_C AAA_22 AAA_30 DEXQc_Suv3 Helicase_PWI AAA_19 Motif Other DBs NCBI-GeneID:  19124434 NCBI-ProteinID:  XP_007687549 JGI:  Cocmi1_4932 UniProt:  W6Z7Y9 LinkDB All DBs Position Unknown AA seq 1993 aa AA seqDB search MSPTVEEAQAQWLEQLQAMRKAIAELGLPPHAEEAPAYGHDIDFDDDDDFSGTASGEDIW DIISDEYEEGYSSDHLDEFTQVPTASNAHDGQWLAAKCSQVARSSSGLDAGALKEQIVAI LSSDSNDEELQMMLADIVGYGELDLVADLISHRQSLLQSLREPAAAQGNSVMGRLQTRAE REEALRRADWEHKNASLAPAMDRTGPQYPHVYKAHDAGNKLSAYGKKYALPPDTVHRDNN LYEEYEIPAVPVGTIDAGRKLIEIRELDGLCQRTFKGYKTLNRMQSLVYPVAYKTSENML ICAPTGAGKTDAAMLTILNTVAKNVIPNPIDEPGATDFTVMAEDFKIIYVAPMKALAAEV TEKLGKRLAWLGIKARELTGDMHLTKAEILDTQIIVTTPEKWDVVTRKSTGDTELVQKVR LLIIDEVHMLHDERGAVLESLVARTQRQVESTQSLIRIVGLSATLPNYVDVADFLHVNKM AGLFYFDASFRPVPLEQHFIGAKGKPGTAKSRENLEKVAFDKVVEMLKLGHQIMVFVHSR KDTIKTARRLYDMAMEEQCTDLFDPQDHPRYENAVRDMKQSKGRELRELLGKGMGTHHAG MPRSDRNLIERLFAEGVLKILCCTATLAWGVNLPAAAVLIKGTQVYNAQEGKFTDLGILD VLQIFGRAGRPQFQDSGIGFICTTHDRLDHYMRAVTEQQPIESRFSSRLIDNLNAEISLG TVTTVSEAVTWLGYSYLFVRMQKSPLMYGIEWSEIRDDPQLVGRRRKLIIDAARTLQRSQ MIIFNETAEDLRAKDVGRIASQYYVQQSSIEIFNAMMRPRSTDADALAMVSMSGEFDQVQ SRESEEKELSALKEQGHVITQVKDGYATSHGKTNYLLQAHISRARLEDFTLVSDTNYITQ NAARIARALFMIALNRRWGYQCLVLLSLCQSIEHRCWSFQHPLHQYELPQPVLRALDHKN PSIQMLRDMDPTEIGDMVHNKKMGNVISKLMQNFPTLSIESEIAPLNRDVLRIRLFLTPD FVWNDRHHGTSESFWIWVENSETSEIFHHEFFILSRKKLYDDHELDFTIPLSDPLPTQVY VRAVSDRWLGAETVHPISFQHLIRPDTESVYTDLLNLQPLPIAALKNPLLEEVYAQRFQY FNPMQSQIFHCLYHTSANVLLGSPTGSGKTVAAELAMWWAFREKPGSKVVYIAPMKALVR ERVQDWGKRLAGPMGLKLVELTGDNTPDTRTIRDADIIITTPEKWDGISRSWQTRGYVRQ VSLVIIDEIHLLGGDRGPILEIIVSRMNYIASQKKDGSIRLLGMSTACANASDLGNWLGV KEGLFNFRHSVRPVPLEIFIDGFPEQRGFCPLMQSMNRPTFLAIKAHSPEKPVIVFVASR RQTRLTARDLINFCGMEDNPRRFLRMSEEDLALNLDRVHDDSLREALSFGIGLHHAGLVE SDRSLSEELFANNKIQILVATSTLAWGVNLPAHLVVVKGTQFFDAKTEGYKDMDLTDVLQ MLGRAGRPQFDDSGIARIFTQDAKKEFYKHFLHTGFPVESSLHKVLDNHLGAEISAGTIT TKQDALDYLTWTFFFRRLHKNPSFYGLEISAEEHNTIAAQSMANDYMVELVETSLRELDE SSCAVVEPTGEVDPTPLGKIMSYYYLSHKTIRYFVQNVKRDATFAEALAWISHATEYDEL PVRHNEDLINMELSKALPISADDFGLPMWDPHVKAFLLLQAHFSRIDLPISDYVGDQNSV LDQSIRIVQATIDVLTELGYRSSCETVISILQAIKSARWPNDGPLSIFPGVDVENEKSRL EHPKAKPKTLIEATSIATADLERAGKFAGVSHGGLKRFIEPISRLPILKLDLGNVNAITL EFKATRQNSARMQQGGVRIYAPRYPKPQTEGFFAIISYSSTDEIVALKRVNWPDPSKNGG NSRGGAGKQPMGSAVRSLLQASVKVSLPPEAQGKRLDISVHSDSYPGMTWGIEGVEIPEA PVVDAYGKGKEKA NT seq 5982 nt NT seq  +upstreamnt  +downstreamnt atgtcgcccactgttgaagaagcccaggcgcaatggctcgagcagcttcaagccatgcgt aaggctattgccgagctgggtctgccccctcatgctgaagaggctcctgcatatggtcat gacattgatttcgatgatgacgacgatttctccggaactgccagtggcgaggatatctgg gacatcatcagtgatgaatacgaagaaggctatagtagcgaccatttggacgaatttaca caagtgcccaccgcaagcaacgctcacgacgggcaatggctagcggcaaagtgctctcaa gtggctcgcagtagttctggcctggacgcaggagcgctcaaggaacaaatagttgctatt ttgtccagcgacagcaatgacgaagaattacaaatgatgctcgcagacattgttggttat ggggagttagaccttgtagctgacctcatttctcaccggcaaagtcttttgcagtcactg cgtgaaccagctgctgctcaaggaaatagtgtcatgggccgcttacagactcgtgccgag cgagaagaagcattgcgacgtgcagattgggagcataagaatgcttcgttggcaccagcc atggatcgtaccggacctcagtaccctcatgtatacaaagctcatgacgccgggaataag ctctcagcctatggcaagaagtatgccctgcctccagatacggtacaccgtgacaataat ctatatgaggagtatgagattccagctgtaccagtaggtacaatcgacgcaggacgcaag cttatcgagattcgagaactcgacggtctttgccaacgcaccttcaaaggctacaagacc ctcaatcgcatgcagagcttagtataccccgttgcatacaagaccagcgaaaatatgctc atctgcgcacccacgggtgccggtaaaacggatgcagccatgcttaccatcctcaacacc gtggcgaagaatgtcatcccaaaccccattgacgagccaggagccactgacttcactgtc atggcggaggacttcaagattatctacgtagcacccatgaaggcactcgctgcggaggtc actgaaaagcttgggaagcgcctcgcatggttgggtataaaagcgcgagaactcacaggg gatatgcacctcaccaaagctgagatcctcgatactcaaatcatcgtcactacccctgaa aaatgggatgtagttacgaggaagagcactggtgacactgagttagtccaaaaggtccga ctcctcatcatagacgaagtccatatgctgcacgatgagcgtggtgctgttctcgaaagc ttggtagcgcgcactcaacggcaagtcgaaagtacacagtccctcattcgaattgttggt ctctcggctacactgcccaactacgtcgatgtggccgatttccttcacgtcaataagatg gctggactgttctactttgacgcctcgttccgtccagtaccgttggaacaacactttatc ggcgccaagggcaagcccggtactgccaaatcacgggagaatctcgagaaagttgcattt gacaaggttgttgaaatgctcaagctcggtcatcaaatcatggtctttgtgcactcaaga aaggataccataaagacagccaggagattgtatgacatggccatggaagagcaatgtacc gatctctttgacccacaggatcatccccgatacgaaaacgctgtgcgggacatgaagcag tcaaagggtagggagttgagggagttgcttggaaaaggaatgggtactcaccatgccggt atgcctcgatctgataggaacttgatcgaacgtctattcgcagaaggtgtcctcaagatt ctctgctgtaccgccacacttgcttggggtgtcaatctgcctgctgcagcagtactcatt aaaggaactcaggtctacaatgcccaagaaggtaagttcacggatcttggtatccttgat gtcttgcagatctttggtcgtgctggtcgacctcagtttcaagacagtggcatcgggttc atctgtaccacacacgatagactcgaccactacatgcgcgccgtgaccgagcaacagcca attgagtcgaggttctctagcagactcatcgataatcttaacgctgagatatctttgggc acggtcacgactgtctctgaagctgttacctggcttgggtattcgtatctattcgtgcgc atgcaaaaaagcccgctcatgtacggaattgagtggtcagagatacgcgatgatccacaa ctggttggaagaaggcgcaagctcatcatcgacgcagcgcgcaccttgcagagaagtcag atgatcattttcaacgagactgctgaagacttacgggccaaagatgttggccgcatcgcg agtcagtattatgtgcaacaatcaagtatcgagatcttcaatgcgatgatgcgacctcgt agtacagatgccgatgccctcgccatggtcagcatgagtggtgagttcgatcaggtacaa tcacgagagagcgaggagaaagaactctctgcactcaaagaacagggccacgtgataact caagtcaaagacggctacgcaacatcacacgggaaaacaaactacctactccaagcacat atttcccgagcacgcttggaagacttcactctcgtatcggacaccaactacatcacacaa aacgccgcgcgtattgcacgtgcattgttcatgatagcgcttaataggcgttggggttat caatgcttggtgcttctgagtctttgccaatctattgagcaccgatgttggtcttttcaa catcctctacaccaatacgaacttccacaaccagtactgcgagccctggatcacaagaat ccttcgatacaaatgttgagggacatggatccaaccgagattggagatatggtgcacaac aagaagatgggaaatgtgatctcgaaactgatgcaaaatttccctacgctgagcattgag tcggagattgccccgttgaacagggacgtacttcggatacgattgtttctcacacccgac ttcgtttggaatgatcgtcaccatggcacttcggaatcgttctggatctgggttgagaat tccgagacatctgagattttccatcacgaattcttcattctatcgaggaagaagctgtat gacgaccacgaactagacttcacaatcccgctatccgacccgctcccgacgcaagtctat gttcgcgccgtttccgaccgctggttgggagcggaaactgtgcaccccatatccttccaa catctgatccggcccgacaccgagagcgtctacacagacctcttgaaccttcagcctttg ccaatagcggcgttaaaaaaccctttactggaagaggtgtatgcacagcgcttccagtac ttcaatcctatgcaatcgcaaatctttcattgcctctaccacacgtctgcaaatgtctta cttgggtcgcctactggcagtggcaagactgttgccgctgaactggcaatgtggtgggca ttccgtgaaaaaccaggctcaaaggtcgtttacattgctccaatgaaagcgcttgtccga gagcgagtacaggattgggggaagcgcctagcagggccaatgggcctgaagctcgtcgag ttgactggtgacaacacgccagatacacgcactattcgagatgctgatatcatcattaca actcccgagaagtgggacggtatcagtcgtagctggcagacccgtggctacgttcgtcaa gtcagcctggtcattattgatgagatccacttattgggtggtgaccgtggtccgatttta gagatcattgtgtcgcgcatgaactacatcgcctcacaaaagaaagatggttccattcgc ctgcttggtatgtcaactgcatgtgcaaatgcatcagatctcggcaactggcttggcgtc aaggagggccttttcaatttccggcactctgtgcgtccagttcccttggaaatctttatt gatggcttcccagagcagcgagggttctgcccactcatgcagtccatgaatcgacctaca ttcctcgctattaaggcccattccccagagaaaccagtcattgtctttgtagcgtctcga agacaaactcgtttgacggctcgcgacttgataaacttctgtggaatggaggacaaccca cggcgcttcctgcgcatgtcagaagaagatctggcgctcaatctggaccgcgttcatgat gattcattacgggaggcattaagctttggtattggtttgcatcatgctggtcttgtcgag tcggaccgctccttgtcggaagagctctttgcaaacaacaagatccaaatccttgttgct actagtacccttgcttggggagtcaatctgcccgctcatctcgttgtcgttaaaggtact caatttttcgacgcaaagactgaaggatacaaggacatggacttgacagacgtcttacaa atgttgggtcgcgctgggcgcccgcagtttgacgactctggtatcgcgcgtattttcacg caggatgccaaaaaagaattctacaagcacttcctacatactggctttcccgttgagtca tcattgcacaaggtcttggacaaccatctgggcgccgaaatatccgctgggacgatcacc acaaagcaagacgcgttagactatctgacatggaccttcttcttccgtcgcctgcataag aacccttcattctacggtctcgagatctcggcggaagagcacaacacaatagctgcgcaa tcaatggccaatgattacatggttgagctggtagagacatcactaagagagttagacgaa tcgtcttgtgctgtcgttgagccaactggcgaagtcgatcccaccccccttggaaagatt atgagttactattacctcagccataaaacgattcgctacttcgtgcagaatgtgaagcgc gacgccacctttgccgaagctttggcttggatttcgcatgctaccgagtacgacgagctc cctgttcggcacaatgaggatctcataaacatggaactttcgaaagcgctaccaatttct gctgacgactttggtctaccaatgtgggacccgcatgtcaaagctttcttactcttgcag gctcacttctcgcgcattgacttgccaatctcagattacgtgggtgatcaaaacagcgta ctggatcagagtatccgtatcgttcaagccacgattgatgttctgacagaacttggctat cggtcttcatgcgagaccgttatttccattctgcaagccatcaagtcagcgcgttggcct aacgatgggccactgtccatctttccaggtgttgatgttgagaatgaaaagagtcgtctc gaacatcccaaagccaaaccaaagaccctaatagaagccacatccattgccacagccgat cttgaacgcgccgggaagtttgcaggcgtctcgcatggtggtctgaaacgcttcatagag cctatatcccgcctacctatcctaaagcttgacctaggaaatgtcaatgccatcactctc gagttcaaggctacacgccaaaactcggcgagaatgcaacagggtggcgtgcgaatatac gcaccgcgttatcccaagcctcagaccgaagggttctttgccatcatctcgtactcaagt accgacgaaattgtcgccctcaaacgggtcaactggcccgacccaagcaagaatggcgga aatagtcggggaggagctggcaaacagccgatgggaagcgccgtgcgctctcttttgcag gcatcagtcaaagtttcactgccaccagaagcgcaaggcaagagattggatatctcagtg cacagtgattcttatcctgggatgacatggggcattgagggagtggagattccagaggcc ccagtagtagatgcatatggcaaaggcaaagagaaggcgtag

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