KEGG   Bipolaris oryzae: COCMIDRAFT_4967
Entry
COCMIDRAFT_4967   CDS       T03125                                 
Name
(RefSeq) hypothetical protein
  KO
K14325  RNA-binding protein with serine-rich domain 1
Organism
bor  Bipolaris oryzae
Pathway
bor03013  Nucleocytoplasmic transport
bor03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bor00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    COCMIDRAFT_4967
   03015 mRNA surveillance pathway
    COCMIDRAFT_4967
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bor03019]
    COCMIDRAFT_4967
Messenger RNA biogenesis [BR:bor03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     COCMIDRAFT_4967
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 19124445
NCBI-ProteinID: XP_007687557
JGI: Cocmi1_4967
UniProt: W6ZQD0
LinkDB
Position
Unknown
AA seq 370 aa
MPSPSPSPARSPSPSRTRSPSRDRSQTRSPSRSPSPRSGSPRRSVSPRSRSRSRSRTRSR
SPRSLSPRRNGRRSYTPNSRSRSRGRSYTRSPTPRDASPAPRSAKIVVEALTRNVKEDHI
REIFGKYGVIKDVRMPMNPTCMPPCRTFAVILLMAKQSTSIAVSHTYSTRRLTKPSVQSQ
KCMTHSWTVPESKFPSCSLDVAFLKPLPQPGEVPRQATDSKTTWIADMDAVDVDHEEEVH
PEHTDHRLWMVLHATALHRAACHLIVDSGDEAEVAEGEEEDGEDAHDRTHGPEAARPEGA
SHALLTAGLRRELRQIEATAVGIARHEEVALAAALAEPEDGEAPVIAPTAATAVGAETAD
DCTISWAVVC
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgccgtctccttctccgtctccagcacgctcgccatcgccatcgcgaacgcgcagccca
tctcgcgacaggtcgcaaacacgatcaccgagtcgctctccttcgccacggtccggctcg
ccacggcgctcagtatccccacggtctcgatcacggtctcgatcacgtacccgatcccgc
tcgcccagatccctctctccccggcgcaatggccgacgcagctacacaccaaacagcaga
tcgcgctcaagagggaggagctacactcgcagccccacccccagggatgcgtcgccagca
ccccgcagtgcaaagattgtggtagaagccttgaccagaaatgtcaaagaagaccacata
cgtgagatatttggaaagtatggcgtcatcaaggatgtcaggatgcccatgaatccaact
tgtatgcccccatgtcgcactttcgcagtcattttactcatggccaagcagtcaacatca
atcgcggtatcgcatacgtactctacgaggagattgacgaagccgagcgtgcaatcgcaa
aaatgcatgacgcacagttggacggttccagaatccaagtttccatcgtgctccctcgac
gtcgcttttctcaaacccctcccccagcccggagaggtcccccgccaggcgacagattcc
aaaacgacttggatagcggatatggacgcggtggacgtggaccacgaggaggaggtccac
ccggagcatacagaccaccgcctatggatggtcctccacgctaccgctctccaccgcgcc
gcatgtcacctgatcgtggacagtggggacgaggcagaggtggccgagggggaagaggag
gatggggaggacgcccacgatcgtacacacggtcccgaagccgctcgccccgaaggagca
tctcacgctcttcttacagccggtctccgtcgagaactccgccaaatcgaggctacggca
gtagggatagcccgccacgaagaggtggccctagcagcggcactggcggagccagaggac
ggagaagccccagttatagctcctacggcagcgaccgcagtcggagcagagaccgccgat
gattgtaccatctcttgggctgtagtgtgttga

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