Bipolaris oryzae: COCMIDRAFT_4967
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Entry
COCMIDRAFT_4967 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
bor
Bipolaris oryzae
Pathway
bor03013
Nucleocytoplasmic transport
bor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
COCMIDRAFT_4967
03015 mRNA surveillance pathway
COCMIDRAFT_4967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bor03019
]
COCMIDRAFT_4967
Messenger RNA biogenesis [BR:
bor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
COCMIDRAFT_4967
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
19124445
NCBI-ProteinID:
XP_007687557
JGI:
Cocmi1_4967
UniProt:
W6ZQD0
LinkDB
All DBs
Position
Unknown
AA seq
370 aa
AA seq
DB search
MPSPSPSPARSPSPSRTRSPSRDRSQTRSPSRSPSPRSGSPRRSVSPRSRSRSRSRTRSR
SPRSLSPRRNGRRSYTPNSRSRSRGRSYTRSPTPRDASPAPRSAKIVVEALTRNVKEDHI
REIFGKYGVIKDVRMPMNPTCMPPCRTFAVILLMAKQSTSIAVSHTYSTRRLTKPSVQSQ
KCMTHSWTVPESKFPSCSLDVAFLKPLPQPGEVPRQATDSKTTWIADMDAVDVDHEEEVH
PEHTDHRLWMVLHATALHRAACHLIVDSGDEAEVAEGEEEDGEDAHDRTHGPEAARPEGA
SHALLTAGLRRELRQIEATAVGIARHEEVALAAALAEPEDGEAPVIAPTAATAVGAETAD
DCTISWAVVC
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgccgtctccttctccgtctccagcacgctcgccatcgccatcgcgaacgcgcagccca
tctcgcgacaggtcgcaaacacgatcaccgagtcgctctccttcgccacggtccggctcg
ccacggcgctcagtatccccacggtctcgatcacggtctcgatcacgtacccgatcccgc
tcgcccagatccctctctccccggcgcaatggccgacgcagctacacaccaaacagcaga
tcgcgctcaagagggaggagctacactcgcagccccacccccagggatgcgtcgccagca
ccccgcagtgcaaagattgtggtagaagccttgaccagaaatgtcaaagaagaccacata
cgtgagatatttggaaagtatggcgtcatcaaggatgtcaggatgcccatgaatccaact
tgtatgcccccatgtcgcactttcgcagtcattttactcatggccaagcagtcaacatca
atcgcggtatcgcatacgtactctacgaggagattgacgaagccgagcgtgcaatcgcaa
aaatgcatgacgcacagttggacggttccagaatccaagtttccatcgtgctccctcgac
gtcgcttttctcaaacccctcccccagcccggagaggtcccccgccaggcgacagattcc
aaaacgacttggatagcggatatggacgcggtggacgtggaccacgaggaggaggtccac
ccggagcatacagaccaccgcctatggatggtcctccacgctaccgctctccaccgcgcc
gcatgtcacctgatcgtggacagtggggacgaggcagaggtggccgagggggaagaggag
gatggggaggacgcccacgatcgtacacacggtcccgaagccgctcgccccgaaggagca
tctcacgctcttcttacagccggtctccgtcgagaactccgccaaatcgaggctacggca
gtagggatagcccgccacgaagaggtggccctagcagcggcactggcggagccagaggac
ggagaagccccagttatagctcctacggcagcgaccgcagtcggagcagagaccgccgat
gattgtaccatctcttgggctgtagtgtgttga
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