Bipolaris oryzae: COCMIDRAFT_569 Help Entry COCMIDRAFT_569    CDS       T03125                                  Name (RefSeq) hypothetical protein   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism bor  Bipolaris oryzae Pathway bor03018   RNA degradation Brite KEGG Orthology (KO) [BR:bor00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     COCMIDRAFT_569  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:bor03019]     COCMIDRAFT_569 Messenger RNA biogenesis [BR:bor03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      COCMIDRAFT_569   mRNA degradation factors    5'-3' decay     Decapping complex      COCMIDRAFT_569 SSDB OrthologParalogGFIT Motif Pfam:  PAT1 Motif Other DBs NCBI-GeneID:  19124703 NCBI-ProteinID:  XP_007682635 JGI:  Cocmi1_569 UniProt:  W7A3X0 LinkDB All DBs Position Unknown AA seq 854 aa AA seqDB search MSFFGFDTTLPRGQGHSTAAPGFGQHDAFAALGGGAADDDVIDFDDTYDGLGDQLDDDAD DRNDDTFGDGPATQQSVGKHFDFAGQTSMVAGTIQEEQMLFHARQKIPQHHQQHQLQQQQ QHQQQHQYQQRPPVPQASKPNRSGYESYKDPEYIPQLEARADIWGLKPKQPAAQRQPSPQ PAAAAQMPAPTRKVMSMEEVEAMMRAQSLNNDSRATPPAQQPPPQAFPGYPQQQYQQQGQ FPQGQPQYPGMPGHIAPQILQRPQQQQQGVPPRHQQQLRAELPDQPIQSQSPQQPTILQR QRPHSNDPGAPQNQIQGSPAQPRQILQNPNRLAGQGQPMQPGPHRGQPGAHNRGPSFPGM VITHPEQLLQLSEAERAAFLEEDAKRAKRNHKIALLAKDNGLMTPQDKNFITRIQLQQLM TATGNLEERGPEAAIAEDFYYQVFSQIRGAPRHNPQQPASQFAQTYLFQTNNRFGARRHG RGGDNHMQRMEQQIQRAVEAAKARPKAKQLVVEGSLGKIAFSNSKTPRPLLNLKRPETND KLPKHARSSIADRKQTLRNIEAVYKTLMQMEDHERAMPMPIQENSPPEAIQAHMEWRSRI EALHEQLWLNTKIMEPINPNTPHPFISILSHAKGKKVIPRLFRHINEQERITVVTMIVVH LDALSVVGQAIATPEEPLSAAIREEVDLFSQTVMSPIHAHISDAPLNIVIGLLGLVLDRT NLHVVARSRIGLTLLTFLISRAELLKQSAPEMATDWQQWTGLYNRLFDVIEPVLPYLFPG SINDTDDMYIWQFLAAMGVGASPEQQQRLVLGVKDRVMETVSVSKALPPDMASARTANVN LFMRAIGLDVELLG NT seq 2565 nt NT seq  +upstreamnt  +downstreamnt atgtccttcttcggcttcgacacgacgctaccacgtggccagggccattcgactgctgcc cccggctttggccagcacgatgcctttgctgccctcggcggcggggcggccgatgacgat gtaatcgacttcgacgatacctacgacggcctcggcgaccagctagacgacgatgccgac gaccgcaatgacgataccttcggcgacggcccggccacgcagcagtcggttggcaagcac tttgactttgccggccagacgtcaatggttgccggtaccattcaggaagagcagatgttg ttccatgctcgccagaagatcccccagcaccaccagcaacaccaattgcaacagcagcag cagcaccaacagcagcaccagtaccaacagagaccccccgtcccccaggcctccaagccc aatcgctctggctatgagagctacaaggaccccgagtacattccccagcttgaggcgcgt gccgacatctggggcctcaagcccaagcagcccgccgcccagcgccagccctcgccacag cccgccgccgctgcccagatgcccgcgcccaccagaaaggtcatgagcatggaggaggtc gaggccatgatgcgcgctcaatctcttaacaacgactccagagctaccccgccggctcag cagccaccgccccaggccttccccggctaccctcagcagcagtaccagcagcagggccag ttcccccagggccagccacagtatcccggcatgcctggccacattgcgcctcagatcctg cagaggccccagcaacagcagcagggcgtgccaccgagacatcaacagcagctccgtgcc gaactgccagaccagcccatccagtcccagtcgccccagcagcccaccattctccagcga cagcgaccccattcgaatgatcccggtgccccgcagaaccagatccaaggttcacctgca cagccccgccagatcctgcagaatcccaaccgcctcgccggccagggccagcctatgcag cctggcccacatcgcggtcagccaggagctcacaacagaggtccttcgtttcctggaatg gttattactcatccggaacagctccttcagctatctgaggctgagcgcgctgctttcctt gaagaagacgcaaagcgtgcgaagcgaaaccacaagattgcccttttggcaaaggacaat ggtctcatgacgcctcaggacaagaacttcatcactcgtatccagctgcagcagttgatg accgcgactggaaatctggaagaacggggccccgaagctgccattgcagaggacttttac taccaggtcttcagccagatccggggtgctccacgccacaaccctcagcagccagcaagc caatttgcccaaacctacctcttccagacgaacaaccgattcggcgcccgtcgacatggc cgtggaggcgacaaccacatgcagcgcatggagcaacagatccaacgcgcagtcgaggct gccaaagcacggccaaaggccaaacaacttgtcgttgagggcagtcttggaaaaattgca ttcagcaactccaagacgccacgaccgctgctgaacctcaagcgaccggaaaccaacgac aagctcccaaaacacgctcggtcctccatcgcagatcgtaaacaaacacttcgtaacatc gaggctgtgtacaagacgttgatgcaaatggaagatcatgaacgtgccatgccaatgcca attcaagaaaacagcccccctgaagccatccaagcacacatggaatggcgatcgcggatt gaggctctccatgagcagctctggctcaacacaaagattatggagcccatcaatcccaac acgcctcaccccttcatttccattctttcacacgccaagggcaagaaggttataccgcga ctcttccgtcacattaacgagcaggagcgcatcacagtcgtgaccatgattgtcgtgcac ctcgacgctctttcggtagtgggtcaggccattgctacacccgaagagcccctgagtgcg gcaatccgtgaggaagtcgatctcttttcccagactgtcatgtcgcccatccatgcgcac atttcagatgcgccgctgaacattgtcattggacttcttggccttgttctagaccgcacc aatctccatgtagtggcgcggagcaggataggccttactctgctaacattcctgatttcc cgggctgaactccttaagcagtcggcccccgagatggcgacggattggcagcaatggact gggctttacaaccgtttgtttgacgttattgagcctgttctcccttacctgttcccaggg agcatcaacgacacagacgacatgtacatctggcagttcctcgcagcaatgggtgtggga gccagcccagagcaacagcagaggctagtactcggagtgaaggaccgtgtcatggaaacc gtttctgtgagcaaggctttaccaccagacatggcgagcgctcgaacagcaaacgtgaac ttgtttatgagggcgattgggctagacgtagagcttcttggatga

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