Bipolaris oryzae: COCMIDRAFT_57856
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Entry
COCMIDRAFT_57856 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
bor
Bipolaris oryzae
Pathway
bor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
COCMIDRAFT_57856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bor03041
]
COCMIDRAFT_57856
Spliceosome [BR:
bor03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
COCMIDRAFT_57856
Complex B
COCMIDRAFT_57856
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
RRM_7
TRIP4_3rd
DUF5737
Motif
Other DBs
NCBI-GeneID:
19124736
NCBI-ProteinID:
XP_007688753
JGI:
Cocmi1_57856
UniProt:
W6ZBC3
LinkDB
All DBs
Position
Unknown
AA seq
204 aa
AA seq
DB search
MTHLLPPMLLNLFAPRPPLRWVEPTDHAPEKRCTPKIGGIAQYMDALREYKDNDGYVPTD
SWLQKRDRKKLEKKEKQEKLITEGVKNYKPSEDPKVQGDAFKTLFVSRLSYGITSDDLER
EFGRYGPIERIRIVEDITQPEDAPPKKRKRGYAFIVFEREKDMKAAYKETDGIKIKDRRV
LVDVERGRTVSGWRPRRFGGGLGG
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgacacatttactcccgccgatgctgttgaacctcttcgccccgcggccgcctctgcga
tgggttgaacctactgaccacgcgccagaaaagcgttgcacgcccaagattggcggtatc
gcgcaatacatggacgctctacgcgaatacaaggacaatgatggctacgtgcccaccgac
agctggcttcagaagcgcgaccgcaagaagctcgaaaagaaggagaaacaggagaagctt
atcaccgaaggcgtcaagaattacaaaccctccgaggatccgaaggtacagggcgacgct
ttcaaaacactattcgtgtctcgtctatcatacggcatcacctctgacgacctggagcgc
gaatttggtcgctacggtcccattgagcgtattcgcattgttgaagacatcacgcagcca
gaagacgcgccacccaagaagcgcaagcgcggttatgcctttattgtgtttgagcgcgag
aaggacatgaaggctgcatacaaagagacagatggcatcaagatcaaagaccgacgtgtt
ctagtcgacgttgagcgcggtcgcacagtttctggctggcgtccacgtcgctttggtggt
ggccttggcggc
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